| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1814 |
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| Symbol | |
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| ID | 5612522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2186356 |
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| End bp | 2188437 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932690 |
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| Product | putative putative ferrichrome-iron receptor |
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| Protein accession | YP_001473553 |
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| Protein GI | 157374953 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CCTTAATGGC TTTCTCGGCG CTGGCCTCCT CATCAGTCTA TGCACACGAT
CACCATGGTG AGATCGAAAT AATCTCAGTT ATGGGGACGA AACAGGCTCA ATCTACAAAT
AGCTCGGCGA TGAAGATGGA CTTGAGTCAC CTTGAAACTC CTGGTTCCAT CTCTGTGTAT
AACCAGGATC TTATCGAGGC GCAGGGTGCT GTGTCGCTGG GGGAGGTGCT GAAGAATGAC
GCGAGTGTTT CAACGGGGAA TGTCAGGAGA GGGCGCGAGC GTTTCTACAT GCGCGGCTTC
GTACTGGAGC CCGATCAGAG CTATCTGCGT GATGGTCAAT TTCACCTTTC GCGCTACTCG
CAACCCATAG AGCTCTACGA GCGTATCGAA GTATTGAAGG GACCTTCGGC ACTGCTATAC
GGCAAGTCGA CACCGGGCGG CATGATAAAT TTAGTGACAA AGCGGGCTCA GCAAGAGGAG
TTTCACTTTA ATTTTCAGCA GGAATTTGGC TCGTTCGGCT ATAACAAGTC GCTGTTAGAT
CTGGGGGGAG CCCTGAACGA GAGTGGCAGC GTCAGAGCCC GTTCAATTCT GTCCAGGTCG
AGCGAAGATG GTTGGCGTGA GTATAAAGAT GGCAGCAAGG CGACTCAGGA GCGCTTTGTC
GGTGCCTTGA TGCTGGAGGC TGATCTCAGT GACGATACGG TATTGAGTGT TAACTATGAT
CGCACCGAAG ATGAGGGGGG GATAGACATG GGTCCCCAAC ATATCAAGAA CGAGAAAAGT
GGTAAGTATG AACTCGCGGG AAAGCGAGAC TATATCTGGG ATATGCCATG GTCATTGCGT
GACTCCAGCG TAGAAAATAT GGGGTTCACC CTCAACTCAT ATCTGAATGA TGATTGGACT
ATCAGCGCTG GCTTTAATCG GCAGCGTCAT CAACGTCAGA CGACAGAGAG CCTATACGGC
AAGGTCCAGG GTATCGATCT CGGCGTTGGT GAATATTCAC TGCGTGGCAG AGACACCTAT
GAACAGTTCG ATGTGGTGAC CGGTTTCTTC GATTTTAAGG GTGAGTTCTA TACCGGTGAC
GTTCACCACA GAATGCTCAT CGGCTCGAGT GTGGTCGATT ATCAAAAAAG TGGTATGCAG
AAAAAGATGA AGATAGCCGA TAGGGTAAAC ATCAACGACG CAATCACTAT TGGCAAGCCA
GAGGAGCTGG ATTATCGCAA TGGCACAGCG CTGAAACAGG TTCAGCGAAA AACCTACGGC
GTTTACATTC AGGACCTTAT CGAATTCAAT GACAGCTGGC ACCTGTTGGC TGGTGTCAGG
TTGGACAGAG AGGAGAGTAA GGAGGCGACG CATAACAACA TCTTACCTAA GCTTGCTGTC
ATGTATCACC CGACACCAAA TACGACTCTG TATACTACCT ATAGCGAGAG TTTTGAGCCC
AAAGATCCTG TCAGTAACAC GGAAGACACC AACTACGGTA AAAAATTGGA TGCCGAAAGA
GGCGAGTCAT TTGAAGTTGG CGCTAAGGGG GAGTTTCTCG ATGGTTCGCT CTATGTCTCG
ACGGCAGTGT TTGATATCGA AAAAAACAAT AAGGCGGTCA CCGATAAGAG TGGGGATAAC
CCCATTACGA CTCAGAGCGG TAAGGTTCGC CATAAGGGGG TTGAGTTTTC CCTCGAAGGT
CAGCTGAGTG ACAATTTGTC GGTGTTAACT TCCATGATGT ACCTCGACGG TAAGATCATC
AGCGACCCAA TATATGCGGG AAAACGGTCG AAAGACACCC CTCAATTCAG TGCCTGCACC
TGGTTTAATT ATCGTGTGGG TGATAAGAGT CAACTCTCTG TCGGAGCCAT ATATGTAGGT
GAACGCTTCG GCGATACCCC CAATTACTTC AAGAAAGATG CCTACGTTAA AGTCGATATG
GGCTTTAGCC ACACCATCAA GTTCGCCAAT GAGCAGCAGG GCATTATCTC AATCAATATC
GATAATCTGT TCGATGAAGA TTATCTGCGA GGTGGCTGTA ATAACAGCGC GATGTTCGGC
TCACCGAGAT CAGTAAAGGT CTCTTTTCAG TATAAGTTTT AG
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| Protein sequence | MSAALMAFSA LASSSVYAHD HHGEIEIISV MGTKQAQSTN SSAMKMDLSH LETPGSISVY
NQDLIEAQGA VSLGEVLKND ASVSTGNVRR GRERFYMRGF VLEPDQSYLR DGQFHLSRYS
QPIELYERIE VLKGPSALLY GKSTPGGMIN LVTKRAQQEE FHFNFQQEFG SFGYNKSLLD
LGGALNESGS VRARSILSRS SEDGWREYKD GSKATQERFV GALMLEADLS DDTVLSVNYD
RTEDEGGIDM GPQHIKNEKS GKYELAGKRD YIWDMPWSLR DSSVENMGFT LNSYLNDDWT
ISAGFNRQRH QRQTTESLYG KVQGIDLGVG EYSLRGRDTY EQFDVVTGFF DFKGEFYTGD
VHHRMLIGSS VVDYQKSGMQ KKMKIADRVN INDAITIGKP EELDYRNGTA LKQVQRKTYG
VYIQDLIEFN DSWHLLAGVR LDREESKEAT HNNILPKLAV MYHPTPNTTL YTTYSESFEP
KDPVSNTEDT NYGKKLDAER GESFEVGAKG EFLDGSLYVS TAVFDIEKNN KAVTDKSGDN
PITTQSGKVR HKGVEFSLEG QLSDNLSVLT SMMYLDGKII SDPIYAGKRS KDTPQFSACT
WFNYRVGDKS QLSVGAIYVG ERFGDTPNYF KKDAYVKVDM GFSHTIKFAN EQQGIISINI
DNLFDEDYLR GGCNNSAMFG SPRSVKVSFQ YKF
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