| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1808 |
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| Symbol | |
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| ID | 5611858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2179647 |
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| End bp | 2181431 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932684 |
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| Product | sulfatase |
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| Protein accession | YP_001473547 |
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| Protein GI | 157374947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00146351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGC GTAAAAAAGA GATGGTACGC GATCGCGTAT CACGACTAGT TAGTTGGGGA
CATTGGTTTG CCTTCTTCAA CGGCTTTCTC GCAATGATCG TGGGGATCCG CTATCTCGAT
AGCGTCGGCT ATCCGGAAAC CTTGTTGGGT TGGTGTTACC TTGCCATCAG CACGATTGGT
CATTTCAGTT TCTTAGCTTT CATCGTCTAT CTGGTTCTGG TTTTTCCGGT CACGTTATTG
CTGCCTTACT CCAAAATATT ACGAGGGTTT GCTGCAGTCG TTGCCACGCT CAGCCTGTGT
ATCTTATTGT ATGACACCAT CATTTATGAT GATTATGGGC TCCATCTGAG TCCCTTTGTA
TTTGATCTGG CTTGGGCCGA TCTCAACGCA TTGCTCCGTG GTACCTCCTA TATTATTACC
CCCCTTGGGA TCATCGCTTT AGAACTCACC TTAGCCAACT TCCTTTGGAA ACGAATTGAA
AAAATTCATA AGGTGAATTG TGGTAATAAG GTGGTGGCTT TCGTCGGTAT CTGTTTTGTC
AGTAGTCATC TGATCCATAT CTGGGCCGAT GCAGCCGATA TTTCCGAGAT CACTCAATTG
GACGACGCCT ACCCACTCTC CTACCCTGCT ACTGCACGCT CGTTTATGGA GAGCCATGGT
ATAGAGGGTA AAAACACGAC TCGTCGCGGC TCAGATCTTA GAAGCAGCTT AAACTACCCG
ATAACACCAT TGCAGTGTAG TGCTGAAGCA CAACCAAATA TCTTACTGAT CACCATTAAT
AATCTCAGAG CCGACATGGT CGACGTCAAT ACCATGCCTT ACCTGACCCA ATACAGTGAA
GACAATCAGT CTTTCCATCA GCACTTAAGC GGTGGCACTC AATTTGATAG TGGTATGTTC
TCCATCCTCT ATGGACTCCA GGGCAGTTAC ATCAATGCAG CCGGTCTAAA CCATACAACC
CCGGTATTGA CGCAAACACT CAAGCAACAA AACTATCAAT TAGGCCTGTT CGCAACCCAA
GAGTCTGAGT TACAACCTGG TGCGATTTTC TCCGATTTTG AACCTACCAC ATCGAAAGTA
AACGACAGTT ATGCCGATGC GGACATTCAA TCTGTTGCAG CATTTAAGAA CTGGCAAGCC
ACCCAGACAA CCCCCTGGTT TGGAATGTTA AACTTACGCT CTCCTGAAAC CTACGACACT
CCAGTCGGTT TCTTAGGCAT AGAAACCGTC AAGGCCGATA AAAAGCTGAA ACCCGCTCAA
CGGGTATTGT TCAATCAATA CAGGCAGTCA TTGAGCTTCA TCGATCAGAA GCTAAAAGAA
GTGCTCGAAG CCACTTCAGA CGATACATTA GTCATCATTA CTGGCGTTAG CGGCAAGCTG
TTCACCAGTA ATCCCGATGA AGCGAGAAGA AATATGTCTC CAGCCAATGT TCATGTACCT
ATGATCATTC ATTGGCCAGG ACAAGCTACG AGCAAACATG TCAACTACCG CACCAGCCAT
TATGGAATAG TACCGACATT GATGACCCAA GTGTTGGGCT GTACCAATGC GGCAACGGAT
TATAGCGCGG GTAGAAGCTT ACTCGAACCG GATACCGAAT CTTGGGTTTA TATCGGGGAT
AGCCGTATCT TTGGTATCTA TCAAAAATCT GAGATCACCG TGATCGACAG ACACGGGCAA
TACCGTATCT ATGATGAAAA CTTCGATAAA AGATTGCGCA AAAAAATGAG TGCGCCTGAG
CTTATCGAAG TGATGCGCGA AGGCCGTAGG ATGTATCATC ATTAG
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| Protein sequence | MVKRKKEMVR DRVSRLVSWG HWFAFFNGFL AMIVGIRYLD SVGYPETLLG WCYLAISTIG
HFSFLAFIVY LVLVFPVTLL LPYSKILRGF AAVVATLSLC ILLYDTIIYD DYGLHLSPFV
FDLAWADLNA LLRGTSYIIT PLGIIALELT LANFLWKRIE KIHKVNCGNK VVAFVGICFV
SSHLIHIWAD AADISEITQL DDAYPLSYPA TARSFMESHG IEGKNTTRRG SDLRSSLNYP
ITPLQCSAEA QPNILLITIN NLRADMVDVN TMPYLTQYSE DNQSFHQHLS GGTQFDSGMF
SILYGLQGSY INAAGLNHTT PVLTQTLKQQ NYQLGLFATQ ESELQPGAIF SDFEPTTSKV
NDSYADADIQ SVAAFKNWQA TQTTPWFGML NLRSPETYDT PVGFLGIETV KADKKLKPAQ
RVLFNQYRQS LSFIDQKLKE VLEATSDDTL VIITGVSGKL FTSNPDEARR NMSPANVHVP
MIIHWPGQAT SKHVNYRTSH YGIVPTLMTQ VLGCTNAATD YSAGRSLLEP DTESWVYIGD
SRIFGIYQKS EITVIDRHGQ YRIYDENFDK RLRKKMSAPE LIEVMREGRR MYHH
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