| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1793 |
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| Symbol | |
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| ID | 5612837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2160876 |
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| End bp | 2161571 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932668 |
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| Product | putative phosphonate ABC transporter, ATP-binding protein |
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| Protein accession | YP_001473532 |
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| Protein GI | 157374932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.360055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAA TTGAAAATTT AACACTCAAA TATGAAGAAA AGCTGGCGAT TCGTCAGCTT
TCTTTGTCAA TTAAGGCCGG AGAAAAGTTG GCGATTATCG GTACCTCAGG GGCTGGTAAA
TCGACACTCT TGACTCACCT GTATCAATGC TTAAAAAATG AGGCCGCCTA TAGCTCTCAG
AAGCAGGGAC TTGTCGAGGG GCTCAGCACC TATCACAATG TGTTTATGGG AGCGCTTGCA
AGGCATCATT GGAGTTACAA TCTATTCAAT TTAGTCTCGC CATTTAAGCA GCCCTTGGAC
CAAGTGACAC AGCTTTGTCA GGAGTTGGAG CTTGATTTCC CAGTCAGTAA GAAGTTATCT
GAGCTCTCTG GCGGTCAGAG ACAAAGGGTC GCCCTGGCAA GAGCCTTGTA TCAACAAAAA
GATATATTTA TTGGCGATGA GCCATTTTCC GCTTTAGATC CTCTGATGAG TAGACGATTA
CTCGACATGG TTTTTGAGCG TCATAACACT GTGATTATGG TGCTCCACGA TAAGTCATTA
GCATTAGAGC ACTTCGACCG AATCATCGGC TTAAAGCAGG GACAACTTCA CTTGGATGCC
CGACAGGATG AGTTAACCTC TGAACTCGTC GATGACTTCT ATTCTGATGT TCCACTTACA
GAAGCAATTC ATGTTTTAGC GGCAAGCGAT GCTTAA
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| Protein sequence | MLRIENLTLK YEEKLAIRQL SLSIKAGEKL AIIGTSGAGK STLLTHLYQC LKNEAAYSSQ
KQGLVEGLST YHNVFMGALA RHHWSYNLFN LVSPFKQPLD QVTQLCQELE LDFPVSKKLS
ELSGGQRQRV ALARALYQQK DIFIGDEPFS ALDPLMSRRL LDMVFERHNT VIMVLHDKSL
ALEHFDRIIG LKQGQLHLDA RQDELTSELV DDFYSDVPLT EAIHVLAASD A
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