| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1759 |
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| Symbol | |
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| ID | 5610650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2114040 |
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| End bp | 2114711 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932629 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001473498 |
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| Protein GI | 157374898 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000431204 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAT CTACACCAAT TATCCATAAA ACGCGCACGC AAGTCGTTGT AGAGGTCCTA
AGGGAAAAAA TTCTATCTGG TGATATTGCC GCTGGTGAAC CCCTTCGTCA AAGTGCTTTA
GCCGATGAGC TCAACGTCAG TCGGATCCCC GTCAGAGAAG CCTTATTACA ATTAGAAGCC
GAAGGCTTAG TCAAATTTGA AGCTCACAAA GGCGCTACCG CCACAAAGTT ATCGGTTGAA
CAAGCCACCG AACTTTTTGA ACTTCGCGCA CTTATTGAAA CAGATCTTCT GGCAAAGGCG
ATTCCTAAGC TGGAAGATGA AGATCTGCTT AAAGCAGAAA AAGTACTCGA TGAGCTGGAA
TCTGCATTTA AGCAAGAAGA TGCCGTCAGT ACCTGGAGCG AGCTCAATAC TCGCTTCCAC
ACCTGCTTAT ATAGCCCGGC AGACCACCCT CATACACTGG AAGTGGTGCA TGGTCTGAAC
ACAAATTGTG ATCGCTATAT CCGTTTGCAG CTACTCCTTG CAGGCGGAAT ACCACAAGCA
GAACAAGATC ATAGAGAGTT GCTTAGTCTT TGCAAGAATA AAGAAATCGA TAAGGCTGTT
GAATTGCTAC GAGCGCATAT TTTGCATGCC GCTAAAGCGA TTCGTGAACT CGTCGCCCAA
CAAGTGGCTT AG
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| Protein sequence | MSRSTPIIHK TRTQVVVEVL REKILSGDIA AGEPLRQSAL ADELNVSRIP VREALLQLEA
EGLVKFEAHK GATATKLSVE QATELFELRA LIETDLLAKA IPKLEDEDLL KAEKVLDELE
SAFKQEDAVS TWSELNTRFH TCLYSPADHP HTLEVVHGLN TNCDRYIRLQ LLLAGGIPQA
EQDHRELLSL CKNKEIDKAV ELLRAHILHA AKAIRELVAQ QVA
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