| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1752 |
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| Symbol | |
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| ID | 5610765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2105027 |
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| End bp | 2105713 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932622 |
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| Product | exonuclease, RNase T and DNA polymerase III |
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| Protein accession | YP_001473491 |
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| Protein GI | 157374891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.974863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0312157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATGG GTTTCGCTTT ACGCTCACAA CTGTGCTGGA GAGCTTTTTT GAGCCGTTCG
GACTCGACTA AACAGTATTA TCGCTCTCAA ATGCCCGCGG TTGGTCAGGT CTTTTCTGAG
TCATCTTTGA TGGCTGTCGA TCTTGAAATG ACTGGCTTAG ACCCTAACAG CGATCAGATA
CTGAGCATCG GCTTAATTCC TATAGAGAAA GGCCTGTTGC AACTTAGTCG CGCCGAACAG
AAGTTGATTC AGATAAACGG CAGTGTCGGC CAGAGTGCAA CCATTCACGG TATCGTCGAT
CATCAGCTAC AAGCGGGTGT CTCTATCGAT TCGGCTATTG AATGGTTCCT GGATCGTACC
AGAGGAAAAT TGTTGGTTGC CCATCACTCT CCATTGGATC TAGGTTTCTT ACAGGTGGCA
ATTAAACAGG TCACGGGAGA GTCGATAAAG TTGCTGGCTA TCGATACCTT GGCCCTTGAA
CGTAAACGTC TGCTTCGCAA ACAAGATGTA TTGAAAGAGG GGACGCTAAG GTTGGGGGCA
TGCAGGGCGC GATATGGTTT ACCCGTTTAT GCTGCTCACA ACGCTTTGGT CGATGCCTTA
GCCTGTGGTG AACTCCTGCT TGCTCAGGTT GCAGCTTTAG GAGATTTGCA CCAGGTGACA
GTCGCTGAAC TGTGTCAGCT ATCCTGA
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| Protein sequence | MVMGFALRSQ LCWRAFLSRS DSTKQYYRSQ MPAVGQVFSE SSLMAVDLEM TGLDPNSDQI
LSIGLIPIEK GLLQLSRAEQ KLIQINGSVG QSATIHGIVD HQLQAGVSID SAIEWFLDRT
RGKLLVAHHS PLDLGFLQVA IKQVTGESIK LLAIDTLALE RKRLLRKQDV LKEGTLRLGA
CRARYGLPVY AAHNALVDAL ACGELLLAQV AALGDLHQVT VAELCQLS
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