| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1719 |
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| Symbol | |
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| ID | 5610185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2064883 |
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| End bp | 2065314 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932589 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001473458 |
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| Protein GI | 157374858 |
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| COG category | [K] Transcription |
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| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000658293 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATCGA TAAAAATTGC AGATTACATG AGCAAGCGTC CTGTTATTTT TACCGCCAAC
ATGCCGATTG CACAGGCGGT TGAACTCTTT TTACAGGCAG GTCAAATTGG CGGTCCCGTT
GTAGATGAAA ACAAGCATGT TATAGGTTTT ATATCCGAAC AGGATTGTCT GATAAAGATG
CTGGAAGCCA CCTACCTTAA TGAAAACCAT TATACAGTGG GTGATGTCAT GCATAGTGAA
CCACTAACCG CACGTCCGGA AGGCTCCGTT TTCGATCTGG CTCAGATCAT GACTAGTGCC
AAGCCGAAAA TCTTCCCGGT GATTGACGAA AACGATCAAC TCATCGGTAT TATCACCCGC
TCAGATGTAC TGAGAGCCAT CGATGATCAA CTCAGGGCTA TGTATAAGCA AGGCCATGAA
CGGCTGGTGT AA
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| Protein sequence | MESIKIADYM SKRPVIFTAN MPIAQAVELF LQAGQIGGPV VDENKHVIGF ISEQDCLIKM
LEATYLNENH YTVGDVMHSE PLTARPEGSV FDLAQIMTSA KPKIFPVIDE NDQLIGIITR
SDVLRAIDDQ LRAMYKQGHE RLV
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