| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1673 |
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| Symbol | |
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| ID | 5610168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2005868 |
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| End bp | 2007787 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932543 |
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| Product | receptor, putative |
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| Protein accession | YP_001473412 |
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| Protein GI | 157374812 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.193509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAT TAAAAATAAG TTATGCAATA ACTCTACTCT TATTATCTAA CTATGTTATT
GCCGATGATA AAATTGAAAA AATATCGGTT CATGGAATTG AATATCAAAC GGAAGGAACT
TATAACAATG TCGCTCTTGG TAGCGACGTT ACCATTATAA GTCAGGAGAT GATTGTTCAA
GCCGGTAGTG TAGACATTAA TAAGATTTTA ACTCAGTTTG TACCGGGGCT TTTTGCTAAT
GGTCGCGCGG GTCGTCACAC CGATACCGAT TACTCTCTTC AGGGCAGCCG TCCGAAAGAT
ATTCTCTGGC TGATTGATGG TAACAGGCTA AATAACCGTC TCTATGGCTC AACCTATACA
GACACGATAA ACCCCATGAT GATCGAGCGT ATTGAGGTGA TCAAAGGGGG ACAAGGTGCT
ATCTATGGAT CCGACGCCAT AGCCGGGGTT ATCAATATAA TAACCAAGCA ATACCAAGGC
CATGATCAGG GAGAGGTATC CCTATCTGCC GATTCACTGC CAAGCTATGA TGCCGGAGCC
TTCGTCAATG CCGAGGTGGG TGACTTTCAA TACACGCTAA GCGCCAGCAG CAGCCAATCT
GAAGGATACC AACTCTGGCC AGATGAAGAG TACTCACCGA CGGCCGCTTT AGATAAAGAG
CGTGGCTACC AGATGAATAA CTTCAGTGGC AAGCTCCGTT GGCAACCCAA TAAAAGCCAT
AGTGTCAGCA TATTTACTCA GCTAAACAAG GGAAAGCTCG AACGCCCGCT CGCTTACAAT
GCAATCTTAA GCGAGAACGA TAGAGAGCAG CAACTCTCCT ACCTCGACTG GCAATATCAA
GCCAGTGAGC AACTACTGCT ACAAACCAAG GTTCATTATC AAGAGTGGGA CTCACATTAC
AGTGAGATAA CGAAAGATAA ACAAGGTAAT ACAGAAATAG CTTACTGGAA CTCCTACTGG
GGATTTACCG ATATAGGTGC GACAATATCG GCAAATTACC TTACCGATAC CGGATCGCAG
CTCCTCACCG GTGTCGAGTT TCAGCAGTAT GATGGCGCCG ATGAAGTGAT GGAGTTTGTC
GCAGTAAAAG ATGACAACTA TGCTGCATTT GTCCAATACC AGCCCACATT TAATGCTCTG
CCCGATACGG CTCTCTCACT GAGTGCAAGA TTCAACCGTA TTTCAGACAG CGACCAACAC
TGGGTTGGCT CATTAGGAAT TACCCATCTG TTGAACCAAA AGTGGCAGCT TAGGGGCTCT
ATAGCCAATG GATACCGTCA ACCCACGGCT GAAGAGTCAC AATCTCAAGT CGGCACCTTA
GGTAATCCTG ATCTTGAATC TGAAACGAGT CAAAACATTA ATCTGGGTGT CACCTTTCAG
GGAGAGGCAA ATATCACTTT CGATGCTTTC TGGCGAAATA TCGATAACCT GATTGAAGCG
ACCGATCTCG GTAATGCGGT TTGGCAATAC AATAATGTGG CAGGAGACGT CACCAGCTTC
GGCGCAGATT TTCATCTTGT CACTGACTTG ACTGAAGCTC TGGAGTTTGA GCTTAGTGCG
GGTTATGCCA ATGCCGAGCG ACAGGATACG GGTGAGCAGA TCTCACGCGT ACCGGAGTTC
ACCGGATTTA GTATGCTCAA TTATCACACT TCAGATGAAC TTAACTTCTG GCTCAGCGGA
AAGTATGTCG GTAAATTCCT GGATTACGGG CTAACCGCAG GCGACTACGT TATCGCGAGT
CTGGGTGCGC AATACTGGTT AACATCAGAT CTTAATCAAC AAGTCTCATT CACCATAGAT
AACCTTTTCG ACAGTGAAGT GACACAAAGT ATCTTCAAGC ACGGCCACCG CGCCGAATAC
CCTATCGCAT CGATGGGTGC CCCTCGTACA CTACAGCTTC AGTATCGTTA CCTGTTTTAA
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| Protein sequence | MSKLKISYAI TLLLLSNYVI ADDKIEKISV HGIEYQTEGT YNNVALGSDV TIISQEMIVQ
AGSVDINKIL TQFVPGLFAN GRAGRHTDTD YSLQGSRPKD ILWLIDGNRL NNRLYGSTYT
DTINPMMIER IEVIKGGQGA IYGSDAIAGV INIITKQYQG HDQGEVSLSA DSLPSYDAGA
FVNAEVGDFQ YTLSASSSQS EGYQLWPDEE YSPTAALDKE RGYQMNNFSG KLRWQPNKSH
SVSIFTQLNK GKLERPLAYN AILSENDREQ QLSYLDWQYQ ASEQLLLQTK VHYQEWDSHY
SEITKDKQGN TEIAYWNSYW GFTDIGATIS ANYLTDTGSQ LLTGVEFQQY DGADEVMEFV
AVKDDNYAAF VQYQPTFNAL PDTALSLSAR FNRISDSDQH WVGSLGITHL LNQKWQLRGS
IANGYRQPTA EESQSQVGTL GNPDLESETS QNINLGVTFQ GEANITFDAF WRNIDNLIEA
TDLGNAVWQY NNVAGDVTSF GADFHLVTDL TEALEFELSA GYANAERQDT GEQISRVPEF
TGFSMLNYHT SDELNFWLSG KYVGKFLDYG LTAGDYVIAS LGAQYWLTSD LNQQVSFTID
NLFDSEVTQS IFKHGHRAEY PIASMGAPRT LQLQYRYLF
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