| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1665 |
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| Symbol | |
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| ID | 5610385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1994466 |
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| End bp | 1996484 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932535 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_001473404 |
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| Protein GI | 157374804 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT CCTACCCCCA TTTAATGGAG CCATTAGACT TAGGCTGTCG AACAATTAAA
AACCGCGGCT TGATGGGCTC GATGCACACC AATTTAGAGG AGGCACCGGG CGGCTTCGAA
CGTATGGCCG CCTACTATGC CAGACGAGCG GCTGGTGGGA TCGGCATGAT AGTCACGGGA
GGATTTGCGC CTAACGTCGA GGGTGGCGGC ATGCCTAATG CGGCCATGAT CGCCACCGAT
GAAGATATCA AAAAACACAG ATTAATTACC GATGCCGTAC ACAAAGAAGA TGGAGTTATC
TGTCTGCAGA TATTGCATAC CGGCCGCTAC GCCTACCAGC CTCAATTAGT CAGCTGCTCC
CCCATACAGG CACCGATAAA TCCATTTGTT CCAAAGGAGC TCGATGAAGC TGGAATAGAG
AAACAGATCC AGGACTTTGT CACCTGTGCG CTGAACTCTC AAATTGCCGG TTATGATGGC
GTCGAGATCA TGGGCTCAGA AGGTTACTTC ATTAACCAGT TTATCTGTAA GCGCACCAAT
CACAGAACCG ATCGTTGGGG CGGCAGTTAT CAAAATCGTA TTCGTTTAGC ATTGGAGATT
GTCCGCCGAA CCCGAGAAGC CGTCGGTAAG GAATTTATCA TCATCTACCG CCTCTCGATG
CTGGATCTGG TCGAAGATGG CAGTACATGG CAGGAGGTCG TCGAGCTGGC GAAAGGGATA
GAGGCGGCCG GTGCCACCAT CATTAACACA GGCATAGGTT GGCATGAAGC CAGGGTTCCA
ACGATTGCAA CCAGTGTTCC CCGCGGTGCT TTTACCGAGA TAACCAAGCG AATGAAGAGG
GAGGTGACAA TCCCTTTGTG TACCACCAAC AGGATCAACA CCCCCGAAGT CGCCGAGGAG
ATCCTGGCAC AAGGTAATGC CGATATTATC TCTATGGCCC GCCCTATGTT GGCCGATCCT
GACTTTATGG TTAAAGCCGA AGCGGACAGG GCCGACGAGA TCAATACCTG TATCGGTTGT
AATCAGGCTT GTTTAGATCA TATCTTCCAG ATGAAATTAG TCTCCTGTCT GGTTAACCCA
CAGGCCTGTC ATGAAACGAA ATTAATCATC GAACCCGCCA CTGAGCTCAA AAATATCGCC
GTGGTGGGCG CAGGGCCAGC CGGACTCGCA GCGGCAACCA CTGCCGCTAA ACGTGGCCAT
AGCGTCACAC TCTTCGAAGC CGATGATAAA ATTGGGGGAC AATTCAATAT CGCCAAGCAA
GTACCGGGCA AAGAGGAGTT CAGTGAAACA CTAAGGTATT TTCAAAGGCA GATAGAGCTT
ACTGGCGTCG AGCTTAAGCT CAACACTAAG GCTGAACCGG AAAACCTAAC CGGTTTCGAT
GAAGTTATTC TGGCAACGGG GATCGTCCCC CGTCAACTTG ATATCCCCGG AATCGACGAC
CCCAGAGTGA TGACCTATCT GGACGTATTG AAGTATAAGA AGCCTGTGGG AAAACGAGTC
GCAATTATCG GTGCGGGCGG CATTGGTTTC GATGTGGGTG AGTACCTGTC CCATCAGGGC
CAATCGTCTA GCCTCGACAA GGAGCGCTAC ATGAAAGAGT GGGGAGTCGA CCTTACGGTT
TCAGCACCTG GCGGTCTGAT TCAACCTCAA GGTGAACCCT CCCCACGCGA GATATTCCTT
ATTCAACGCA AGAAGACAAA AGTTGGCGAC GGTTTAGGTA AAAGTACAGG CTGGATCCAC
CGTACCGTAT TGAAAAATAA AGGGGTCAAG ATGATCAAGG GCGCCCGCTA CGACAGAATT
GATGAGCAAG GACTTCACAT CACTGTCGAT GGTGAAAGCC AAGTTTTAGC GGTAGACAAT
ATCATCATCT GCGCCGGACA GGACTCACAC AGGGAGCTTC ATTCGAGCTT AATAGCCGAA
AATATTAAGG TGAGTTTAAT AGGAGGCGCC GATATCGCAT CGGAGCTGGA TGCCAAGCGT
GCCATTAAAC AGGGTACAGA GGTCGCCGCG GCGCTTTAA
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| Protein sequence | MSKSYPHLME PLDLGCRTIK NRGLMGSMHT NLEEAPGGFE RMAAYYARRA AGGIGMIVTG
GFAPNVEGGG MPNAAMIATD EDIKKHRLIT DAVHKEDGVI CLQILHTGRY AYQPQLVSCS
PIQAPINPFV PKELDEAGIE KQIQDFVTCA LNSQIAGYDG VEIMGSEGYF INQFICKRTN
HRTDRWGGSY QNRIRLALEI VRRTREAVGK EFIIIYRLSM LDLVEDGSTW QEVVELAKGI
EAAGATIINT GIGWHEARVP TIATSVPRGA FTEITKRMKR EVTIPLCTTN RINTPEVAEE
ILAQGNADII SMARPMLADP DFMVKAEADR ADEINTCIGC NQACLDHIFQ MKLVSCLVNP
QACHETKLII EPATELKNIA VVGAGPAGLA AATTAAKRGH SVTLFEADDK IGGQFNIAKQ
VPGKEEFSET LRYFQRQIEL TGVELKLNTK AEPENLTGFD EVILATGIVP RQLDIPGIDD
PRVMTYLDVL KYKKPVGKRV AIIGAGGIGF DVGEYLSHQG QSSSLDKERY MKEWGVDLTV
SAPGGLIQPQ GEPSPREIFL IQRKKTKVGD GLGKSTGWIH RTVLKNKGVK MIKGARYDRI
DEQGLHITVD GESQVLAVDN IIICAGQDSH RELHSSLIAE NIKVSLIGGA DIASELDAKR
AIKQGTEVAA AL
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