| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1646 |
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| Symbol | |
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| ID | 5611055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1967540 |
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| End bp | 1968121 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932516 |
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| Product | protein-glutamate methylesterase |
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| Protein accession | YP_001473385 |
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| Protein GI | 157374785 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.534702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGTA ATGGTACACA TTATCGAGCG GTAGTGATTG GTGCGTCCGC AGGAGGTTTG
GCAGCCGTTG AAAAGGTACT TAGCCAGCTT AAAGCATCAT TTTGTTTACC TATTCTTTTA
GTGCAGCATA TTAGCCCACA TACACAAAGT TATTTAGCGA CTCACTTTGA AGACAAGTGT
GCTTTAACTG TTAAAGAAGC TGATGATAAA GAGCCAATCA AGCGAGGCTA TTTTTATATT
GCGCCACCAA ATTATCATTT ATTGGTTGAA TATGATGGTT GCGTTGCACT ATCCATTGAT
CCACCAGTGA ATTTTTCAAG GCCATCCATT GATGTGTTAT TTGAAAGTGC CGCAGATTAC
TTTGGCAAGG AACTCATTGG TATCGTACTC ACCGGGGCCA ATTCTGATGG TGCTTTAGGG
CTGAAAAAAA TCAAAGAACA TGGTGGTTTA ACTGTTGTAC AAACCATTGA AACTTCTGAG
GCACAGGCTA TGCCAGCTGC TGCAATACAG ACTGGTTGCG TTGATCATAT TCTTTCTCTG
GAAGTGATCG GCGATTTTTT AAATGAAATA TGCGAATGCT AA
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| Protein sequence | MNCNGTHYRA VVIGASAGGL AAVEKVLSQL KASFCLPILL VQHISPHTQS YLATHFEDKC
ALTVKEADDK EPIKRGYFYI APPNYHLLVE YDGCVALSID PPVNFSRPSI DVLFESAADY
FGKELIGIVL TGANSDGALG LKKIKEHGGL TVVQTIETSE AQAMPAAAIQ TGCVDHILSL
EVIGDFLNEI CEC
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