| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1634 |
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| Symbol | |
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| ID | 5611010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1952522 |
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| End bp | 1955311 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932504 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001473373 |
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| Protein GI | 157374773 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.554729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.391625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGAAT CTTTGCAAAT CATAAAAAGC CCTAATGATC ATCGCCGATA TCAGCACCTG
GTGTTGGAAA ATGGTTTATC TGTTCTGCTG GTCGAAGATA AGCAAGCCAG CCAGGCTGCC
GCATCGATGG CAGTAAACGT CGGCCATTTT GATGATCCGC TCTCCAGACC CGGAATGGCG
CACTTTCTCG AGCACATGCT TTTTCTTGGT ACAGAAAAGT TCCCGGAATC CGGCGAATAC
CATGCCTTCA TCAATCAACA TGGCGGCAGT AATAATGCGT GGACAGGGAC AGAACAGACC
AACTTTTTCT TCAGTATAAA TGCAGATGTA TTCGAAGAGT CACTCGACCG CTTTAGCCAA
TTTTTTATCG CTCCTCTGTT TAGCAAGGAG CTGGTCGATC GTGAACGTCA TGCTATCGAG
TCCGAATTCA GCCTGAAACT CAAAGATGAT ATTCGCCGCA CGTATCAGGT GCAGAAGGAA
ACCGTCAACC CAGCTCACCC TTTTTCAAAA TTTTCAGTAG GGAATTTAGA GACCTTAGCT
GGGGATGAGT CGACTTTAAG AGAAGAGTTA ATCAGCTTTT ATCAGTCTCA TTACAGCGCT
AATTTGATGA CGCTATGTCT TGTAGCACCA TCTCCTCTGG CCGATTTAGA GACGTTAGCG
AATACCTACT TTAGCGATAT TGAGAATCAT CAAATCAAAA AAGCGTATCC TGAAGTTCCC
ATATATCAAG CAGAACAGCT AGAGTCGCAG ATAAATATAA TTCCAATTAA GGAGCAAAAA
AGGGTCGCCA TGACCTTTAG CCTACCCGCA ATAGATCCTT TCTATAAACA CAAGCCCTTG
ACCTTTATCA GTCACCTACT GGGTTACGAA GGCAAAGGCA GCTTACTCTC TTATCTTAAA
GATAATGATT TAGCTGTGAA TTTATCAGCT GGCGGTGGCG TCAACGGCTA CAATTTCAAA
GATTATAACA TTAGCATTCA ACTGACCGAT AAAGGGGTCG CTAACCTGGA TACAGTCATT
GAATGCGCTT TTGAGTATAT TGAACTTATC AAGACAAAAG GGATGCAGGA ATGGCGCTAT
AAGGAGCGGG CCAACTTATT GAAACTGGCG TTTAAATATC AGGAACAGAT TAAGGCGCTG
GATCTGGCCA GCCATCTCAG CATCAATATG CATCATTACG ATGTTGAAGA TCTTCTCTTC
GGTGATTACA AGATGGATAG CCTCAACGTT CCCGAGACCC TGAGTCTATT AAATATGATG
ACGCCATCGA ACCTTCGCGT TCAACTCATC TCTTCTGAGC TTGATACAGA ACGTCAGGCA
GCCTGGTATC ACACACCTTA CCAAATAAAA GCCATCACCC CAGAGAAGCT AAAACACTGG
AGTCAACTGA CCATAAGGCC TGAGCTAAAA TTGCCTGACG CCAACCCGTT TATTATCGAA
GACTCAATTC CCAGGGCCGA TAAAAGCCAA AACAGAGTCC CCGTTATCGT CTCTCAGGAA
AAGGGATACC GCATCTGGCA CAGAAAAGAT GATGAATTTA ATGTGCCTAA GGGACACCTC
TATCTGTCAC TCGATTCGGT ACAGGCCGCT TCTTCACCTA AAAATGCTGC ATTAACGCGG
CTGTATGTTG AGATGCTACT CGACTACCTC ACCGAATTTA CCTACCAGGC CGAAGTGGCC
GGGCTCAGTT ACAATATTTA TCCACACCAG GGTGGGATCA CACTGCACCT CACCGGGTTT
ACCGGCAAAC AAGAGGTGCT ACTGGCCCTT CTGATTGATA AAGCGAGGGA ACGAAATTTC
ACTCAAGGTC GGTTTAATCT GATTAAACGA CAGATTTTAA GGAGTTGGTA TAACCAGGCG
AGAGCAAAAC CTATCTCTCA AATATTTACC AGCCTCACGG TTACCTTACA GAAACGCAGT
TATGAACCAT CACGCATGGC TGAGGAACTA GAGGGGATCA CACTCGAAGA TCTTCACGAG
CATGTCAGAA GCTTCTTTGA AAAGATCCAC CTCGAAGGCT TGGTCTATGG TGACTGGCTG
GAAAGTGAAG CTCAATCATT AGGTAAACGC TTGGACCACA TCTTATCTCT CGTCTCCTCT
CCAAGCAGAG AATCAGAGCG TGAGCTGGTT AACCTGGCGG GACACGGGAC TATGATGCGA
GAACTGGATG TCTCACATCA GGACAGCAGC ATCATAGTCT ACTATCAAGC CGATGCAGCT
TCAGCAGATC AGATGGCTCT GTTTAGTTTG TTGAACCACA CTATGTCATC GACCTTCTTC
CATGAATTGC GCACTAAGAG GCAGCTAGGT TACATGGTAG GCACAGGGTA CCTGCCGCTA
AACAGATACC CGGGGATGAT CTTCTACATT CAGTCACCGA CATCGGGGCC AAGACAGCTT
TTAGAAGCGA TTGATGAATT TATTGCAGAT TTTAACTATG CCGTGATGCA GATAACCAAC
GAGCAATGGG AAGTGACGAA GCAAGGGCTG ATCAATCAAG TGATGGAGCA CGATCCCAAC
TTAAAGACTC GCGGGCAGAG GTATTGGTCG AGCATAGGTA ATAAAGACTA TCAATTCACC
CAAAGGGAAC TCGTAGTCAA AGAGGTTGCT AAATTAACCC GATCCGACTT AATCAAATTT
ATGATGAAGA AGATGCGTAC TAAGCACTGC GATAGGCTAG TCCTGTTCAC TACCGGCGAA
AGCCACGGTA ACCTGGAACC CTTGACCTCA GATAATATGA TCACCGATCT ACGCACCTTT
AAGCTAAATG CAGACAAATT TAGTTACTAA
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| Protein sequence | MPESLQIIKS PNDHRRYQHL VLENGLSVLL VEDKQASQAA ASMAVNVGHF DDPLSRPGMA
HFLEHMLFLG TEKFPESGEY HAFINQHGGS NNAWTGTEQT NFFFSINADV FEESLDRFSQ
FFIAPLFSKE LVDRERHAIE SEFSLKLKDD IRRTYQVQKE TVNPAHPFSK FSVGNLETLA
GDESTLREEL ISFYQSHYSA NLMTLCLVAP SPLADLETLA NTYFSDIENH QIKKAYPEVP
IYQAEQLESQ INIIPIKEQK RVAMTFSLPA IDPFYKHKPL TFISHLLGYE GKGSLLSYLK
DNDLAVNLSA GGGVNGYNFK DYNISIQLTD KGVANLDTVI ECAFEYIELI KTKGMQEWRY
KERANLLKLA FKYQEQIKAL DLASHLSINM HHYDVEDLLF GDYKMDSLNV PETLSLLNMM
TPSNLRVQLI SSELDTERQA AWYHTPYQIK AITPEKLKHW SQLTIRPELK LPDANPFIIE
DSIPRADKSQ NRVPVIVSQE KGYRIWHRKD DEFNVPKGHL YLSLDSVQAA SSPKNAALTR
LYVEMLLDYL TEFTYQAEVA GLSYNIYPHQ GGITLHLTGF TGKQEVLLAL LIDKARERNF
TQGRFNLIKR QILRSWYNQA RAKPISQIFT SLTVTLQKRS YEPSRMAEEL EGITLEDLHE
HVRSFFEKIH LEGLVYGDWL ESEAQSLGKR LDHILSLVSS PSRESERELV NLAGHGTMMR
ELDVSHQDSS IIVYYQADAA SADQMALFSL LNHTMSSTFF HELRTKRQLG YMVGTGYLPL
NRYPGMIFYI QSPTSGPRQL LEAIDEFIAD FNYAVMQITN EQWEVTKQGL INQVMEHDPN
LKTRGQRYWS SIGNKDYQFT QRELVVKEVA KLTRSDLIKF MMKKMRTKHC DRLVLFTTGE
SHGNLEPLTS DNMITDLRTF KLNADKFSY
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