Gene Ssed_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1632 
Symbol 
ID5614036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand- 
Start bp1947003 
End bp1947608 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID640932502 
Producthypothetical protein 
Protein accessionYP_001473371 
Protein GI157374771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.881231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0521212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TATTAGCTAC GACTACTGCC CTTGTATTTT CAACTTCTAC AATGGCGTTT 
GACACTCCTA CGATTAATCC AAGTCAAGAC CTTCTCTCAA ATGTACAAGC TACAAAGCTA 
GAGAGTTCTG TCGAGATTGC AGGTGGTTAC CCACACGTTA AATTCAAGCC ATTAGAGCTT 
GCTGGCGGAT ACCCTCACGT TAAGTTCAAG CCGTTAGAGC TTGCTGGTGG CTACCCTCAC 
GTTAAGTTCA AGCCATTAGA GCTTGCTGGC GGCTACCCTC ACGTTAAGTT TAAGCCACTG 
GAAGTTGCAG GCGGCTATCC TCACGTTAAG TTTAAGCCAC TAGAAGTTGC AGGCGGTTAC 
CCACACGTTA AATTCAAGCC ATTAGAGCTT GCTGGCGGAT ACCCTCACGT TAAGTTCAAG 
CCATTAGAAC TTGCTGGCGG ATACCCTCAC GTAAAATTCA AGCCATTAGA GCTTGCTGGC 
GGCTACCCTC ACGTTAAGTT CAAGCCATTA GAGCTTGCTG GCGGCTACCC TCATGTTAAG 
TTCAAGCCAT TAGAGGTTGC TGGCGGATAC CCTCACGTTA AATTCATCAA CTCTGCAATT 
GCTTAA
 
Protein sequence
MIKVLATTTA LVFSTSTMAF DTPTINPSQD LLSNVQATKL ESSVEIAGGY PHVKFKPLEL 
AGGYPHVKFK PLELAGGYPH VKFKPLELAG GYPHVKFKPL EVAGGYPHVK FKPLEVAGGY 
PHVKFKPLEL AGGYPHVKFK PLELAGGYPH VKFKPLELAG GYPHVKFKPL ELAGGYPHVK 
FKPLEVAGGY PHVKFINSAI A