| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1620 |
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| Symbol | |
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| ID | 5611561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1933919 |
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| End bp | 1934623 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932490 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473359 |
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| Protein GI | 157374759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00313028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000317582 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAGC TTAAATTTAG ACGACAGGCC TATGGAGAGC CAAACTGTCA AGATGAGGAT
TTTCTCACAG CGATGCACGA TTCCCCTGAG CGTGAGTCCT TTCTCAATGA TCTGAAAAAG
CTCGATAGTA AACTTGAGCG GGCTTTAAAG GTCGATGTGC CTGAAGACTT GGCAGCAAAG
TTACTATTGA ATCAACAGCT CCATCAGCAT CAGGTTCAAC GTCGTAAATC TGGTTTTACG
CTCGCACTCG TCGCCTCAGT CGCATTTATT GCCGGGATCA GTTTCACTCT CTTAAGAATG
GGGCCGGTTG ATTTAGGCGA GCATGCCCTT GCCCATGTCT ATCATGAAGC AATGGCCCTT
AAGGTCGATG ATAATGTTGG CTTCGATGAA GTTAACTTCC AACTGGCAGC GATGGGGACA
TTAGGTAACG CAAAATTCAC GCAGCAGCCC GGTAAAGTCT TTTACAGTAC TGATTGCGAT
TTTCAGGGGG TGAAAAGCTT ACATCTGGTA ATGCAGGGCG AGCACGGCAA GGTCACCCTG
TTTATCGTTC CGCTTGAAGA CCGCATGGTC TTAGATGAAG CCTTTGCAGA CAATAACTAT
ATAGGCCAAG GCTTTGCCAC CGATAAGGCT TATATGTTAC TGGTTGGTGA AGATACCGCA
GATCTGGGGT TCGTAAAAAA AGAGATTAAG CAAACCTTCA TCTAA
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| Protein sequence | MDELKFRRQA YGEPNCQDED FLTAMHDSPE RESFLNDLKK LDSKLERALK VDVPEDLAAK
LLLNQQLHQH QVQRRKSGFT LALVASVAFI AGISFTLLRM GPVDLGEHAL AHVYHEAMAL
KVDDNVGFDE VNFQLAAMGT LGNAKFTQQP GKVFYSTDCD FQGVKSLHLV MQGEHGKVTL
FIVPLEDRMV LDEAFADNNY IGQGFATDKA YMLLVGEDTA DLGFVKKEIK QTFI
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