| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1521 |
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| Symbol | |
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| ID | 5613217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1809479 |
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| End bp | 1810123 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932387 |
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| Product | phage SPO1 DNA polymerase domain-containing protein |
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| Protein accession | YP_001473260 |
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| Protein GI | 157374660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAA GTAATAGCGA TACGCTCGAC GCTTTAATCA ATCAGATCTC TGCCTGTCAA
CTTTGTCGGG CAGAGCTTCC CTACCCGCCG AAACCGATCA TTCAAGTTAG TGCAGACGCA
AAAATTCTTA TCGCAGGACA AGCCCCGGGA CAAAAGGCCC ATGAGCAGGG GTTACCTTTT
AAGGATGTCA GTGGTGACAG ACTCAGGAGT TGGCTCGGTG TAACAAGCTC ACAATTTTAC
GACCCAAATT TATTTGCCAT TTTGCCTATG GGATTTTGTT TCCCGGGCAA TATCATTCGA
AACGGAAAAA AAGCCGGCGA TAAGCCTCCG ATACCCCTAT GTGCCAAGAG TTGGCGACAA
GCGATATTGA GTCATTTAGA TAAAGTCGAG CTAACAGTGA TCCTTGGGCA GTACGCTATC
GACTATCATC TGGATAACGA TACTCCTGAT TCAGACAAGT GCTCAAAAAA GTCCTCCAAG
ATCTCAGTTA CATCAGCGGT GGCAAGCTGG AAGCAGTACT GGCCATCACA AATAGTCCTG
CCCCACCCCA GCCCTCGAAA TAATATCTGG CTTAAACGAC ACCCTGAATT TGAAACAGAG
ATCCTTCCTC AACTCAAACT CAGGGTTAAG AGCATCATAA GTTAG
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| Protein sequence | MALSNSDTLD ALINQISACQ LCRAELPYPP KPIIQVSADA KILIAGQAPG QKAHEQGLPF
KDVSGDRLRS WLGVTSSQFY DPNLFAILPM GFCFPGNIIR NGKKAGDKPP IPLCAKSWRQ
AILSHLDKVE LTVILGQYAI DYHLDNDTPD SDKCSKKSSK ISVTSAVASW KQYWPSQIVL
PHPSPRNNIW LKRHPEFETE ILPQLKLRVK SIIS
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