| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1513 |
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| Symbol | |
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| ID | 5613346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1800734 |
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| End bp | 1801831 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932379 |
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| Product | steroid dehydrogenase |
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| Protein accession | YP_001473252 |
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| Protein GI | 157374652 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCA GCAATCTCTC TGTCTCTAAC AGGCAAATGG CTCTAGAGCA CTACCATATT
GATGAGCAAT TGGTGCTCAA AAAATTAAGT GGTCAGGTTA AGCGGGCTTT TGTCACCGGG
GCCGGAGGTT TTCTGGGAAA GGCCATCTGT CAGCGTTTGA TCGCGGCAGG CGTTGAGGTT
ACCGGCTTTG CCCGTGGCGC CTATCCTGAG CTTTCAGCCA TGGGCGTTAA TATGATCCAG
GGGGATATTA GCGATAACCT TGCTGTAATA GATGCGATGA AGGGTTGCGA ACTGGTGTTT
CATGTCGCGT CTAAAGCCGG GGTGTGGGGC TGTAAGCAAA GCTACTTCTC ACCCAATGTC
GATGGTGCAG CCAATATCAT TAACGCCTGT AAGCGGCTCA ATATCGGATA TCTGGTCTAT
ACCAGTACCC CCAGCGTTAC CTTTGCCGGC GCCGATGAGG CGGGGATCGA TGAAACGGCA
CCCTATGCCG ATAAGTATCT CAACTATTAT GGTGAGTCGA AGGCGATTGC CGAGCAGATG
GTGCTTGATG CCAATGGATC CAAACTAAAA ACGGTCTCAT TAAGGCCGCA TCTTATCTGG
GGGCCCGAAG ATCCTCACCT GGTGCCTCGC GTCATCGAAC GCGCTCGCGC AGGGCGGCTT
AAGTTGGTGG GGCGTGAAGA TAAACTTGTC GATACTATCT ATGTCGGCAA CGCTGCTTAT
GCACATATTC TTGCGGCGTT AAATCTGACT GAAGAGCAAT CCTCAGCTGC GGGCAGAGCC
TACTTCTTAA GTAATGATGA GCCCATTACT ATGGCCGCCA TGCTCAATAA GATATTGACC
TGTGCCGACC TGCCTGAAGT CGATAAGCGA GTACCCGCTA ACCTGGCGTA CGCTGTCGGT
GTGATTCTTG AAACGATTTA TGGTCTGCTT GGCAAAACAG AAGAGCCCTT GATGACACGT
TTTGTCGCAA GGCAGCTCTC TACCTGTCAC TACTTCGATA TCTCGGCAGC GAAGAGAGAC
CTGGGTTATT CGCCCTTAGT GAGTATCGAC CAAGGCATGG TGAAACTGAG AGAGTACCTA
GAAGCCAATC CTGTTTGA
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| Protein sequence | MSASNLSVSN RQMALEHYHI DEQLVLKKLS GQVKRAFVTG AGGFLGKAIC QRLIAAGVEV
TGFARGAYPE LSAMGVNMIQ GDISDNLAVI DAMKGCELVF HVASKAGVWG CKQSYFSPNV
DGAANIINAC KRLNIGYLVY TSTPSVTFAG ADEAGIDETA PYADKYLNYY GESKAIAEQM
VLDANGSKLK TVSLRPHLIW GPEDPHLVPR VIERARAGRL KLVGREDKLV DTIYVGNAAY
AHILAALNLT EEQSSAAGRA YFLSNDEPIT MAAMLNKILT CADLPEVDKR VPANLAYAVG
VILETIYGLL GKTEEPLMTR FVARQLSTCH YFDISAAKRD LGYSPLVSID QGMVKLREYL
EANPV
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