| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1502 |
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| Symbol | |
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| ID | 5610816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1786659 |
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| End bp | 1788311 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932368 |
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| Product | phosphate ABC transporter, inner membrane subunit PstA |
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| Protein accession | YP_001473241 |
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| Protein GI | 157374641 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4985] ABC-type phosphate transport system, auxiliary component |
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| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0125389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGT GGTTTAAATC CGGGTCTCCG TGGATATGGA TGACTGGTGG GGCGGTGAGC
ATCAGCTTAA TTGCCGTACT GGGATTATTG TTGATGATTG CCTGGCGTGG CCTCAGCTAT
TTCTGGCCTG CAGAAATTTA TCAGTGGGAG CTGAACGATC CAGAAGGTGA TCGTTACACC
TTAATTGGTG AAATATATGA TAAAGAGGAG GTGCCAACCG AGCGTCTTAT CTCTGCGGGT
CATGTGTTTA AGGAGACGCC AGGTGAAACG GTGACGCGTT ATCTGGTTAA AACCGGTAAC
CGTGAGTTCG TTGGATTGGA TTTTCGCTGG ATATTAGCGA CAGATATCAT CTCGCGCACT
CAACCTGAAA ATATTGCCGT GATTGAGAGA AGTAAAAACG GTGATTTCTA TGGTTACCCG
ATTGCAGTGG TTGAAGATGG AAAGCGACTC GCCCTCGATG ATATCGAGGC CTCTTTTGAG
GCGCATATCG AACGTGCCGT AGAGCTCAAT GATCAAGCGG TAACACTGCA AAAGAGTGAA
ATCGGGTCGA TAAACCATGA AATGGAACAG CTTCGTTTAC GGGAAAGACG TTATGAGTTA
GATGGTCAAC TCACCGAGGG GCGCAAGGCG GAAATTGCAA TTAAGCAAGC GAGCTTGCAG
GCTGAATACT TGCTGCTGGA GAAGTCCTTC TTTGCCCTTC GCACCGAAGC GGCACGAGAC
TCGGTGATCA TCAAAGATAT GCGCGGCGAA GAGGTCGTGC TCAAACTCGA TACGATTTTA
GATGTTACCT ATTCCAATCG TATCAGCCTG ATAGGAAAAA TCGGCCACTG GTTTGTCGGT
ATCGGCCGGT TTGTCAGCGA TGACCCACGG GAAGCGAATA CTGAAGGCGG TGTATTCCCG
GCTATCTTCG GTACGGTGTT TATGGTGATG TTGATGGCGG TTATTGTGAC CCCTTTTGGC
GTTATCGCGG CGATCTATTT GCATGAATAC GCTAAGAAAG GGCCTGTGAC TAAGATGATC
CGTATTGCTG TGATTAACTT AGCGGGTGTG CCATCGATTG TGTATGGTGT ATTCGGCCTT
GGCTTCTTCG TCTATATGTT TGGTGGCACG TTAGATCAAC TCTTTTACCC TGAGGCGCTG
CCTGCCCCGA CTTTTGGTTC GCCGGGCGTG CTCTGGTCTG CATTAACGTT GGCGATTTTG
ACTCTGCCTG TGGTGATAGT TTCAACCGAA GAGGGACTGA GCCGCATTCC CAGTGCCGTA
CGTCAAGGCA GTTTAGCGCT TGGGGCTACA AAAGCTGAGA CACTTTGGCG CATTGTTATC
CCCATGGCGA GTCCGGCCAT TATGACGGGA TTGATTCTGG CGGTGGCCCG CGCCGCCGGT
GAAGTTGCTC CATTGATGCT GGTGGGAGTC GTAAAGCTAG CACCGACCTT GCCAATCGAC
ATGAATTTCC CATTTGTGCA CTTGGAACGT AAGTTTATGC ACTTAGGTTT TCACATTTAT
GATGTGGGTT TTCAAAGCCC TAACGTGGAA GCCGCGAGAC CTTTGGTCTA TGCGACTTCG
TTCCTGCTCG TTTCAGTCAT CGTGTCATTA AACTTGACTG CTATCGGCGT ACGCAACCAT
TTACGCGAGA AGTATCGCTC GCTTGAGCAT TAA
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| Protein sequence | MGKWFKSGSP WIWMTGGAVS ISLIAVLGLL LMIAWRGLSY FWPAEIYQWE LNDPEGDRYT
LIGEIYDKEE VPTERLISAG HVFKETPGET VTRYLVKTGN REFVGLDFRW ILATDIISRT
QPENIAVIER SKNGDFYGYP IAVVEDGKRL ALDDIEASFE AHIERAVELN DQAVTLQKSE
IGSINHEMEQ LRLRERRYEL DGQLTEGRKA EIAIKQASLQ AEYLLLEKSF FALRTEAARD
SVIIKDMRGE EVVLKLDTIL DVTYSNRISL IGKIGHWFVG IGRFVSDDPR EANTEGGVFP
AIFGTVFMVM LMAVIVTPFG VIAAIYLHEY AKKGPVTKMI RIAVINLAGV PSIVYGVFGL
GFFVYMFGGT LDQLFYPEAL PAPTFGSPGV LWSALTLAIL TLPVVIVSTE EGLSRIPSAV
RQGSLALGAT KAETLWRIVI PMASPAIMTG LILAVARAAG EVAPLMLVGV VKLAPTLPID
MNFPFVHLER KFMHLGFHIY DVGFQSPNVE AARPLVYATS FLLVSVIVSL NLTAIGVRNH
LREKYRSLEH
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