| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1439 |
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| Symbol | |
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| ID | 5609649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1706979 |
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| End bp | 1707635 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640932305 |
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| Product | hexapaptide repeat-containing transferase |
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| Protein accession | YP_001473178 |
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| Protein GI | 157374578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTAA ATCCGGTGTG TCGGTTAATT AAAGGTAACA TCTTGAATAC TCCCGACTAT
CAGAGCCAGC ATAAGAAACG ACTATCTCAT ATGCCCTGGC TCTATTTCAG TCTCAAACCT
AAGCTTCTGA ACTGGGCGAA GCCTTGGCAG GAGCAGGTTC AGGCCGACTT TATGGCATTG
GAGACCGTCT CATTCGGAGA GAACTGTTTC ATCGCTCCCG AGATCAATCT GTTCGCCGAA
CCGGGAAGAG GTATCCAGAT AGGCGATCTA TGTATGATAG CCGCCGACAG CTTTCTCCAT
GGTCCCATCA CCTTAGGCGA TGAGGTTGCA ATCAACCACG GCTGCTCCCT GGACGGCGGC
CGCGCCGGCA TCACCATAGG CGACCAGACC CGTATCGCCA ATAACGTCAC CATCTACGCC
TTCAACCATG GAATGCACCC GGATCAACCT ATCTACCAGC AAAGTGTCAC CTCTGAGGGG
GTCGTCATAG GCAAAGATGT CTGGATAGGC GCGCAGGTTG GCATCGTCGA TGGCGTCACC
ATAGGCGATT GCGCCGTCAT CGGCATGGGC TGTATCGTCA CCAAAGATGT CCCCGACTAT
GCCATCGTGG CGGGTAACCC GGCTCGGGTG ATTGGCGACC GAAGGGAGAA GGTGTAG
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| Protein sequence | MRLNPVCRLI KGNILNTPDY QSQHKKRLSH MPWLYFSLKP KLLNWAKPWQ EQVQADFMAL
ETVSFGENCF IAPEINLFAE PGRGIQIGDL CMIAADSFLH GPITLGDEVA INHGCSLDGG
RAGITIGDQT RIANNVTIYA FNHGMHPDQP IYQQSVTSEG VVIGKDVWIG AQVGIVDGVT
IGDCAVIGMG CIVTKDVPDY AIVAGNPARV IGDRREKV
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