| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1431 |
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| Symbol | |
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| ID | 5611549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1695671 |
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| End bp | 1696603 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932297 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473170 |
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| Protein GI | 157374570 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.214757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA AAGAAATCGA TATGCTCAAG GATGAAGCTG AGACTCATGT AGAAACGGAT
ACTTCTGAAC AAGAGGATTC GCTCGGATCA CTATTAAAAG CTGCCCGTGA AAAACAGGGC
GCGAGTGTTG CCGATATCGC AGGGCAACTG CACCTACGCC CTTGTATCGT TGAAGATATT
GAGGCGGACA ACTTCGGTGA AATAGCCTCG GCGACCTATG TTAAGGGCTA TGTAAAAAAT
TACGCTCGTA TCGTTCAGGC CGATAAGAAA GCCATTCAAG CTTGCCTGGA CAGGCAGTTA
CCTAAGGCTT CAGCGCCCGA GATGCAGAGC TTTTCCCGTA AAACGACACG TCAGGCCCGC
GATGGCCGTT TGATGTTTGT GACCTATTTG ATTGCCTTTA TCTTATTGGC TCTGCTGGTG
CTTTGGTGGG TACAAAAGTC TGACACCCTG TCCGATATCG ATCTTTCAAA ACCAACCGTT
GAAGAGATGG CCGATTCTCA ACTGACACAA GTCGAGGTTG CGTCGACGCT TGTCGAAGAG
GGCGACCCCC TAACCGGTTT GCAAACAGAC ACTCATACTG CCACCGCTAC AAAGACCCCG
AGCGATAGAG AGAGCGAGAA AGGCGAACAA GCCGATGCCG TTGAGATGGA GAGTGTACCG
ACCAGCGTAG AAAAGGCGGT AACAAGACTG TCATCATTGA GTTTCGACCT AAATGGCGAC
TGTTGGATAA ACGTCAAAGA CGCGAAGGGT GATACCTTAA TTAATGATCT TAAGACTGCC
GGCAGCCAGC TCAATGTTTC CGGAGTCGAA CCATTTAAAA TTACTCTGGG GGCCCCTCAG
GCTGTAAGTA TCAAATTAAA TGGTGAGAAG GTAAGCCTGA GTGACTTTCC TAACGGGCGG
GTGGCAAGGT TAACCTTGCC CATGGCGCAA TAA
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| Protein sequence | MTKKEIDMLK DEAETHVETD TSEQEDSLGS LLKAAREKQG ASVADIAGQL HLRPCIVEDI
EADNFGEIAS ATYVKGYVKN YARIVQADKK AIQACLDRQL PKASAPEMQS FSRKTTRQAR
DGRLMFVTYL IAFILLALLV LWWVQKSDTL SDIDLSKPTV EEMADSQLTQ VEVASTLVEE
GDPLTGLQTD THTATATKTP SDRESEKGEQ ADAVEMESVP TSVEKAVTRL SSLSFDLNGD
CWINVKDAKG DTLINDLKTA GSQLNVSGVE PFKITLGAPQ AVSIKLNGEK VSLSDFPNGR
VARLTLPMAQ
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