Gene Ssed_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1394 
Symbol 
ID5613705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1653971 
End bp1654294 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content54% 
IMG OID640932259 
Producthypothetical protein 
Protein accessionYP_001473133 
Protein GI157374533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCGC TGACCATACT AAACTGGGTG TTAGATGGCC TGTTGGGAGT GAGCTTGTTC 
AGTCTGGCCT GGCTGGCACT CGCGAGCACG GATATTTTCA AGGCGATTGT GCTGTTTATC
AGCTTCGGGC TGCTGATGGC ATTAGCTTGG GTGCGGCTCA ATGCGCCGGA TATAGCTCTG
GCTGAGGCGG CTATTGGTGC GGGTCTGACC GGCGCCCTGT TGCTGGCCGC ATACGCGCGA
CTCAAGGATA TCAGTAACGG TGCATCTGAC GGTGAGGACG TTCAGTCACA TATTCAAGAT
GATTCAGATG AGGAACCAAA ATAG
 
Protein sequence
MEALTILNWV LDGLLGVSLF SLAWLALAST DIFKAIVLFI SFGLLMALAW VRLNAPDIAL 
AEAAIGAGLT GALLLAAYAR LKDISNGASD GEDVQSHIQD DSDEEPK