| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1384 |
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| Symbol | |
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| ID | 5612882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1647155 |
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| End bp | 1648153 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932249 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473123 |
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| Protein GI | 157374523 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3528] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.368075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATC AGGTTTCAAA GCGCTTTATC AGTACCTCTA TTCTCTTGCT CATCTCTCCC
TGGGTAAGTG CAGGACAATG GCATCTTCAG GTAGATAATG ACTTCATCTT CAAAGATGAC
GGTAACTATA CCAACGGCTT AACGCTTGGT TGGGAGAGTG CTCCGCTACA AAATCTGGAT
GACACAGCCT CCCCTATACG CTGGCAAAGT TTGTTTAGCT TCAAGCAGAA CAGTGCACAA
CGAGCCTGGG GAGTGAAACT CACACAGCAG ATGTGGACAC CCGGTGAAAT CAAGATTGAG
ACTCCCCAAC CCTACGACCG CCCCTATGCC GGCTACTTAG CGATTGAAAG TCACACCGCG
ACCTATGGAG AAACTTGGGC CCAGAAAAAC TGGTTATCAT TGGGTATTTC AGGGCCGGCT
TCCGGTACTG AGCAGTTACA GAAACTGTTC CATAAGCTCA CGCCATCATC GACACCGAAT
GGCTGGCAAC ATCAGATTGA AAATCAATTA ACGATTCAAC TTGCCTATGA ACTAGATGCG
CTTATTATGC GCAGAGATGC ATTCAGTAAC GCATTTACAG GTGAAACACT GTGGGAGCTG
AGCGGCTTTA GTCATTCACA AGCGGGGAAC TTTCGCAGTG AAGCGGATCT CGGGTTAACC
TTCAGGTGGG GGACAAATTT AGCAGACTCA TTTGCTCGCT TAAGCCAGCA TAGTGGTCAA
TTCGGTAACA TCTCGGCCAC CACTAAATTC AGCAGCTGGA TGCTCTTCAC CCGGGCCTAT
GTGGGATATC GATTCAATGA TCTGACCATA GATGGATCCC TTCCCTACAA CTCCCATGTT
GAGTTTGAAA ACAGTCAGGC GGGTGTCACC ACAGGCATTA TCTGGGCCCA TCCAAGCTGG
TCTCTCGCGT GGAGCTTTAA TGCTTACACC AAAGAGTACC AGAGCGATCC CGACAGTTGG
CATGGTTATG GCTCATTAAT CATCAGCTGG CAGTTGTAA
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| Protein sequence | MNYQVSKRFI STSILLLISP WVSAGQWHLQ VDNDFIFKDD GNYTNGLTLG WESAPLQNLD
DTASPIRWQS LFSFKQNSAQ RAWGVKLTQQ MWTPGEIKIE TPQPYDRPYA GYLAIESHTA
TYGETWAQKN WLSLGISGPA SGTEQLQKLF HKLTPSSTPN GWQHQIENQL TIQLAYELDA
LIMRRDAFSN AFTGETLWEL SGFSHSQAGN FRSEADLGLT FRWGTNLADS FARLSQHSGQ
FGNISATTKF SSWMLFTRAY VGYRFNDLTI DGSLPYNSHV EFENSQAGVT TGIIWAHPSW
SLAWSFNAYT KEYQSDPDSW HGYGSLIISW QL
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