| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1357 |
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| Symbol | |
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| ID | 5613098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1613501 |
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| End bp | 1614220 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932222 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473096 |
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| Protein GI | 157374496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCA GCCAGCGATT GAGTCAGATA GACAAGATGA TAAACAATCA CTATGACCAT
ATTTGGGATT GTTGTTGTGA TCATGGGCTG CTTGGTGCCA GACTCCTTCA AAGAGGCGCT
GCAGGCACCA TTCACTTCGT CGATGTGGTC GATGAGCTGA TGATGGATCT CGAAAAAAAA
CTCACCCGCT TTTTCCCCTC AGACCAATTA AGCGATGACA CTTCCTCGGC TGATGAAATG
CAGACGAGTC ATTGGCAAGT TCACTGTATT GATGTGGCAC ATCTGCCTAT CGCTGATTTT
GACGATTGTG AGTCACATCT AATCATCATT GCAGGGGTCG GAGGTGAGTT GCTTATCGAG
TTAATCGGCT CAATTATGAC TAACTACCCA AGCAAACATT TTGAGTTTAT CCTCTGCCCG
GTTCACCACA ACTACAAACT CAGGCAGCAC TTAGGTCAAC TGAAGTTGGG TCTGGTCAAT
GAATGTCTTA TTCAGGAGAA CAAACGTTTC TATGAAATAA TGCATCTGTC TACAGACTGC
GAGCAAGCCA TCGTGAACGT CGGTTCTATC ATGTGGAACC TGTCTCAGGA TGCGGACAAA
CAATACCTGT ATAAAACGAT ATTGCATTAT GAACGCATGC AAAAAAGTGC CGGCGAGGAT
GCCGATATGT TGGCGCAGAT CATCGATGAC TATCGCGCAC TGGAAAAGCG CATTAAATAA
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| Protein sequence | MKISQRLSQI DKMINNHYDH IWDCCCDHGL LGARLLQRGA AGTIHFVDVV DELMMDLEKK
LTRFFPSDQL SDDTSSADEM QTSHWQVHCI DVAHLPIADF DDCESHLIII AGVGGELLIE
LIGSIMTNYP SKHFEFILCP VHHNYKLRQH LGQLKLGLVN ECLIQENKRF YEIMHLSTDC
EQAIVNVGSI MWNLSQDADK QYLYKTILHY ERMQKSAGED ADMLAQIIDD YRALEKRIK
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