| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1324 |
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| Symbol | |
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| ID | 5611024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1575419 |
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| End bp | 1575754 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932189 |
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| Product | SecC motif-containing protein |
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| Protein accession | YP_001473063 |
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| Protein GI | 157374463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0189954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGATA AATTTTTCTT TAAAGGGCGT CAAACCCCTA AGCCTAAACA TGAAAGTTTT
GGCTATAACA CTAAACGAGT AGCTAAGCCG GGCACCAGTG ATAACCCATT GACCTTAGTC
GTCCCCTCGA AGGAGCGCCA AGCACAAATC GAGGCTATCT TGAGCCAGCA TGAGTTATTG
GCCAATATAG AGGTTAACGC AGAAGCGGAA GAGAACATTG CTGAATTGGA TGGCATACTC
AATAAACCAC AAACCACTCG TTTTGAAAAA AAGCCCAACA GAAATGAGCC TTGCCCTTGC
GGCAGCGGGA ATAAATACAA GAAATGCTGT GGTTAA
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| Protein sequence | MSDKFFFKGR QTPKPKHESF GYNTKRVAKP GTSDNPLTLV VPSKERQAQI EAILSQHELL
ANIEVNAEAE ENIAELDGIL NKPQTTRFEK KPNRNEPCPC GSGNKYKKCC G
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