| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1313 |
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| Symbol | |
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| ID | 5611302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1558317 |
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| End bp | 1559180 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932166 |
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| Product | phosphatase |
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| Protein accession | YP_001473052 |
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| Protein GI | 157374452 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000703264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGGAC ATGATTTCGT CCCTCAGCTT ATATCAACCG CGAAAGCATG GTTAGAGGAA
TCCGAGTTTA TTCTATTTTC TGCGGGTGCA GGAATGACCG CAGCGGCTGG TATTAACTAC
GCTGATACGG CTCTATTTAA ACGTGAGTAC CCGGCCATGC TACAGTATGG GTTTAATGCT
CAATATGAAC TCATTGGCTT TGATAACTGG ACACCCGATT TGCAATGGGG GTATTGGGCT
GCGCATGTCA ATTTTGTACG CTTTAAATGG CCTCAGACAG AGGTATATCA ACAATTTCAC
CAATTAGCGG CACATATTGA TAATGAAAAT ACCTTTGTTA TGACATCCAA TGTTGATGCC
ATGTTTGAGC GCAATGGATT TGATGCAAAC CGTATCTATA CGCCTCAAGG CGATTATGCA
CTGTTGCAAT GTACCACACC ATGTACCGAT GACGTATGGC CGTGGAAAGC ACAAATTGAC
AAAATCATAG CAGCAACGGA TCCTAAAACT CAGCGCCTTT TAGACAACTC CTTGATTCCC
TGCTGTCCAA ACTGTGGCGG CACCGTATTC CCTAATGTTC GTTCAGATGC TTCATTTATT
GATGCTCACT TACTCCCTAA CGGACGGGGT TTAGAAAAAT GGTTGAATCG GGCAAAAGAT
AAAAAAGGCG TAATCATAGA GGTAGGTGCA GGTTTCAATA CTCCGTCAGT TATCCGCTGG
CCTAATGAGC ACATAATATG TTCAATGCCA GACTGGAAAC TTTTACGTAT TAACTTCACC
CATGCTGATG TCCCCGATAA TCTATCAAAA CGAGCTATCG GATTTAAGGG AAATGCAGCA
AACATAATCC AAAACCTGCA ATAG
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| Protein sequence | MNGHDFVPQL ISTAKAWLEE SEFILFSAGA GMTAAAGINY ADTALFKREY PAMLQYGFNA
QYELIGFDNW TPDLQWGYWA AHVNFVRFKW PQTEVYQQFH QLAAHIDNEN TFVMTSNVDA
MFERNGFDAN RIYTPQGDYA LLQCTTPCTD DVWPWKAQID KIIAATDPKT QRLLDNSLIP
CCPNCGGTVF PNVRSDASFI DAHLLPNGRG LEKWLNRAKD KKGVIIEVGA GFNTPSVIRW
PNEHIICSMP DWKLLRINFT HADVPDNLSK RAIGFKGNAA NIIQNLQ
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