| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1263 |
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| Symbol | |
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| ID | 5614231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1499112 |
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| End bp | 1500230 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932116 |
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| Product | SecC motif-containing protein |
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| Protein accession | YP_001473002 |
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| Protein GI | 157374402 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.638763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0088654 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTTGG AAAATGAGTT TTACAAACTA CCTTTAACCT TCGATGTTGA ACGGTTAAAG
AGAGAGGTTC TACAATTCGA TGAAAGCGAT TGGGCTCCTC ACCATGAACA TTTCGAAGGC
AACTCTGCGA TCCCATTAAT ATCGGTGGGC GGCGGGTTTA ATAATGAGTT CAAAGGTGAG
ATGAGTCAGA CCCCAGCATT AACGCGCTGC TCATATATTC AGCAGGCCAT TGCCTCCTTT
GGCGAAGTGG TCGGTCGCTC GAGGTTAATG CGGTTAGCAC CCGGCAGTGA AGTTCCACTG
CATTGTGATA TCAATTACCA CTGGCATAAA CGAGTCAGGA TCCATATTCC CATCGTCACC
GAAGAGAGCG TCATTTTTCA TTGTGGCGAA AAACAGGTCC ATATGGCTGC CGGAGATTGT
TGGATTTTCG ACTCATGGAA ACATCATAAG GTCATCAATA ACAGTGACTG CTTTAGGGTA
CATCTGGTCA TTGATATTAT TGGTTCGAGT CGCTTCTGGT CTATGATTAG AGACCGCTCC
ACAACTTCAC CTTCGGTGGC GGCTCCTCAT AATCCCAGCC ATTTCCTGGC ATACTCTAAT
GATCGCCCCA CACCATTGAA AACTGAAAAA TTCAACTTCC CGGTCATCAT GTCACCGAGT
GAAATTGAAA ATCTAACGAA TGAACTACAC TCTCAAGTCA TGGCATTTTC GCTCAATAAA
GCTGATTTAG CACAAGAGTT CATCAGGATA ATTAAAGACT TCAGCTTAGA CTGGCAAGAG
TTATGGTCGC AATTTGAAGC AAAAAAAGAA GGTTGGCCCT TCTATCATCA ATTAAGGCAA
CGCACTTTAG AGCAAGCATC TGTTTTTGAA AAAACGGTTA GGGTCAATGA GCAAACCTCG
GCCATGAAGG TATTAGTCCA TCTCATTATC GCCCCTTCGA TGAGCACTGA ACTTGCCCAG
TCGGCTCCCT CCACAGTGGC TGAGCCCGCT ATAGTATCCT CAGCCAAACG CAGCTCTGAA
ATAAATAGAA AAAAACCGGC GAAATCAATG AGCAGAAACA GCCCATGTCA CTGTGGTTCA
GGGGAGAAGT TCAAACATTG CCATGGAAAG GTGAGTTAA
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| Protein sequence | MQLENEFYKL PLTFDVERLK REVLQFDESD WAPHHEHFEG NSAIPLISVG GGFNNEFKGE
MSQTPALTRC SYIQQAIASF GEVVGRSRLM RLAPGSEVPL HCDINYHWHK RVRIHIPIVT
EESVIFHCGE KQVHMAAGDC WIFDSWKHHK VINNSDCFRV HLVIDIIGSS RFWSMIRDRS
TTSPSVAAPH NPSHFLAYSN DRPTPLKTEK FNFPVIMSPS EIENLTNELH SQVMAFSLNK
ADLAQEFIRI IKDFSLDWQE LWSQFEAKKE GWPFYHQLRQ RTLEQASVFE KTVRVNEQTS
AMKVLVHLII APSMSTELAQ SAPSTVAEPA IVSSAKRSSE INRKKPAKSM SRNSPCHCGS
GEKFKHCHGK VS
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