| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1214 |
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| Symbol | |
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| ID | 5611310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1446738 |
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| End bp | 1447874 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932063 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472953 |
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| Protein GI | 157374353 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4299] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.011285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.863101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTG CTCAAGCTAA GGTCTCCAAA CGTCGATTAA TGTCTCTAGA TGCACTTAGG
GGGTTCGATA TGTTTTGGAT TTTGGGTGGT GAAGTACTAT TTGCGGGTTT GTTAGCCTGG
ACTGGTTGGC AAGGCTGGCA ATGGTTTGAC ACCCAGATGC ACCACAGTGA GTGGCATGGG
TTTACCTTTT ACGATCTCAT CTTTCCATTA TTCATTTTTC TATCGGGAGT GGCATTAGGT
CTGTCGCCAA AGCGGTTAGA TAAGCTACCC ATCGCCAAGA GAATGCCGCT GTATATACAC
GCTGTTAAGC GGTTATTACT CCTGCTTTTC TTCGGTATTC TTTACAACCA TGGCTGGGGA
ACGGGAGTCC CGGTTGTACT CGATGAAGTT AGATATGCCA GTGTGCTTGG TCGAATCGCT
TTTGCCTGGT TTTTTGCTGC TATCCTGGTA TGGCATACCT GTTTGCGTAC GCAAATAATC
ATCATGCTTG GCATTTTGGT TGGTTATGCG CTCCTTCAGC TATTTTCCCC GGTGCCAGGG
TATGGGGCAG GGAGTTTCAC TCCAGAAGGT TCTATTAATG CGTTTGTCGA TACTCATTTC
CTTCCCGGGA TCACTTACCA GAACCGACCA TTAGATCCTG AGGGAATATT GTCAACTATC
CCCGCCGTAG CGAATGCTTT AGCTGGTGTG TTTGTCGGAC ATTTTATCAT TAAGCCTCAT
CCTAAAGGTG AATGGTTTAA AGTGGTTTAT ATGTTAGTCG CGGGTGCTGC CTTCTTGGGA
CTCGGTTGGC TGCTTGATTT CATTGTGCCG GTAAATAAGG AGTTATGGAC CAGCTCATTT
ACCTTGGTAA CCATAGGCTG GAGTTTAATT CTGCTCACTG TCTTCTATGC TATTGTCGAT
CTACTTAAGT GGCAGACACT GGCTTTCCCC TTTGTTGTTA TCGGGTGCAA CGCCATTATC
ATCTATCTTG CCTCTAGCCT CATCGATTGG AAATACATCG CACAAGGTCT CTTTGGCGGG
ATCATCAATG CCTCCCCCGC AGCGGGCCAA CAACTGGTCG CCGTTATTTC ACTGCTGTTA
GTACAGTGGT TGCTGCTGTT TTGGATGTAT AGGCGAAATA TTTTCATTAA GGTTTAA
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| Protein sequence | MEVAQAKVSK RRLMSLDALR GFDMFWILGG EVLFAGLLAW TGWQGWQWFD TQMHHSEWHG
FTFYDLIFPL FIFLSGVALG LSPKRLDKLP IAKRMPLYIH AVKRLLLLLF FGILYNHGWG
TGVPVVLDEV RYASVLGRIA FAWFFAAILV WHTCLRTQII IMLGILVGYA LLQLFSPVPG
YGAGSFTPEG SINAFVDTHF LPGITYQNRP LDPEGILSTI PAVANALAGV FVGHFIIKPH
PKGEWFKVVY MLVAGAAFLG LGWLLDFIVP VNKELWTSSF TLVTIGWSLI LLTVFYAIVD
LLKWQTLAFP FVVIGCNAII IYLASSLIDW KYIAQGLFGG IINASPAAGQ QLVAVISLLL
VQWLLLFWMY RRNIFIKV
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