| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1098 |
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| Symbol | |
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| ID | 5612257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1301267 |
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| End bp | 1302688 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931947 |
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| Product | putative alkaline phosphatase |
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| Protein accession | YP_001472837 |
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| Protein GI | 157374237 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1785] Alkaline phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.374892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00462057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTGCTT TAACAGCCTG TTTAACGCTC TCAATATTGA GTAGTGGCAT CTTTACGGCT
CAAGCAACAG CAAGAGAGAT AGTCATAGAA GATGAGCATC TTCCCAGAAA TATCATCTAC
CTGATCGGCG ATGGTATGGG TCCGGCTTAC ACCTCAGCTT ACCGATATTA TTCAGACAAT
CCCGATACTA AACCCGTCGA GAAGACGATA TTCGATGACC TGCTCGTAGG CATGGCAAGT
ACCTACCCGG ACGATGATAC CTATGTCACC GACTCGGCCG CGGCGGCAAC CGCGCTGGCC
ACCAGCACCA AGAGCTATAA CGGTGCCATC TCGGTTGACC ATCAGCACCA TGCGCTACCG
ACCCTACTCG AGATAGCTAA GCACAAGGGG AAAACAACGG CCATCGTTGT GACATCTCAG
ATAAATCACG CCACCCCAGC CAGCTTTCTG GCCCACAACG AGAGTCGAGG AAATTACAAT
GCTATCGCCG ATAGTTACCT TACAAATCTA ATCAAGGGTA AACCCGTCGC AGATCTTATG
TTGGGCGGCG GTACTAAGTA TTTCGTTCGG GAGCAGCGAG ACCTGACATC TGAGTTCGAA
GCACTCGGTT ATCAGTATAT CGATAGGCTC GAGCAGCTGG ACGAAGTTGA GACGCTGCCG
GCATTAGGCC TGTTTGCGCC ATCGGGACTT CCAGCAGCAT TGGGCAGCGA TGACCCTCTC
AGACTCACCA CGATGACACA CAGCGCATTG AGGCTGCTAT CATCACAATC TGCACCATTT
GTGATGATGA TTGAAGGCAG TCAGATAGAC TGGTGTGGTC ATAGCAATGA TATCGTCTGC
GCCATGACCG AGATGCACGA TTTCGCCAAC ACCTTAGAGA GGGTAAAGCG CTATATCGAC
AATCATCCCG ACACCTTATT GGTTGCCACC GCAGATCACT CCACCGGCGG GCTCACACTC
GGTAAGAATG GGGTATACCA GTGGAAAGGT AAGCAATTAC AAATGATCAC TATGCTGCCC
GAAGAGATTG CAGACAAGTT GATTGCATCG CCAAAAATTC TGGATAAACC GGACAGCTTC
AATACTTTCT GGTCTGAGTA TATCGGCATA ATCCAATCCG TTGAGGCACA AGATAAGTTA
AGGCAGCAGA TCCTGGCCAA TCTTCAACAA GACAAGGGCG ATCTTCAAAC AGCCAAGGAC
AAAGTTGAGA CTCTGATAAA GTCAGCCATA GATACCCTGA CTCACACAGG TTGGACAACC
TCGGGTCACG ATGGCATCGA CGTACAAATT TTTGCCTATG GAAGAGGCAG CCACTACTTC
GCAGGACATA TGGATAATAC TGAGATAGCG GCAAACTTAA TCGAGATGAT AAATAGCGAA
AAAGCCAGCC ATAACGCGCT GTTACTGGAA CCCAGAATTT AG
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| Protein sequence | MRALTACLTL SILSSGIFTA QATAREIVIE DEHLPRNIIY LIGDGMGPAY TSAYRYYSDN
PDTKPVEKTI FDDLLVGMAS TYPDDDTYVT DSAAAATALA TSTKSYNGAI SVDHQHHALP
TLLEIAKHKG KTTAIVVTSQ INHATPASFL AHNESRGNYN AIADSYLTNL IKGKPVADLM
LGGGTKYFVR EQRDLTSEFE ALGYQYIDRL EQLDEVETLP ALGLFAPSGL PAALGSDDPL
RLTTMTHSAL RLLSSQSAPF VMMIEGSQID WCGHSNDIVC AMTEMHDFAN TLERVKRYID
NHPDTLLVAT ADHSTGGLTL GKNGVYQWKG KQLQMITMLP EEIADKLIAS PKILDKPDSF
NTFWSEYIGI IQSVEAQDKL RQQILANLQQ DKGDLQTAKD KVETLIKSAI DTLTHTGWTT
SGHDGIDVQI FAYGRGSHYF AGHMDNTEIA ANLIEMINSE KASHNALLLE PRI
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