| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1086 |
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| Symbol | |
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| ID | 5612604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1287656 |
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| End bp | 1288675 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931935 |
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| Product | general secretion pathway protein B |
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| Protein accession | YP_001472825 |
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| Protein GI | 157374225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.970223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0086707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCATAT TACTCGAGGC CGTCACGCGG GCTAAACAAC AGGAGCTGGA GTCCGATCTC
GACCCTGTAT TAACGCCCAG AGCTCAGTAC GATAATTTTT CTAAACCCAA AAACAACACA
CTGATGTTGT CGCTCATCGT GATTATATTG AGCCTGTTGG TCGTCATTGT CTGGCTGGCA
ACGAGTCACT TCTCGTCGGG CAATACTCCC TCTGTTCAAG TTTCGAGCGA AGCCCGAACT
CCAGAAGGTC ACTCCTCTGT ACCGTTAAGC ACCGATGGTC AACTTAAGGG ATCTGCTGAG
GTAGAAAAAA ATAGATCAGC CTCTGGTGAT AATGACGTTA AATTAGCCGG AAAAGTTGCC
CTGCCTTTAG CTATGGCGCT TCCGACCAAG TCTGTCGTTG TTGAGAGTCG TTACCCTAAG
GCTGTACCTG TGCAACAAAG AAGAGTACAG CATGAAAAGG TTAGCGCTGT CGAGGTGGCT
CAACTGAATC CTGAGAGTGA ACCTTCATCT GTGGCTGAAG AGCCGATAAT ATTAGGTGCG
AATAGCAACC ACAGAGGACA AGAGGTGCTC GATGCGCTTA AGTATCAGGT GGATGAGGCT
GCTTCTGAAC TAGGAATGAA TAAGGCTCCC GTTCAGTCAG ATACTCCTGA GCAGAAGGAG
CAGTACCAGA GTAAGAATAA CTTATTAGCG GCATTTGAAG CGGCGCTTAA AGAGGTTGAA
GTAGAAAAGT CTGTCGCCAG CCCGGTGACA GAGCCTAAAC TCGACCCTAT TCCTACCCCA
AAAGCGGATG ATTTACCTAA ATATGGCCAG TTACCGGCGG GGTTACAACT ACAAGTGCCG
GAATTTAATA TTAACGCTCA TGTGTATTCG AGTGCTCCCG ACAATCGTTG GCTTAATGTC
GATGGTGCCG AGCTACAGCA AGGCGATATG ATTGGAGGCA AGTTAGAGAT TATTGAGATA
CGTCCGAGAG ATGTGGTGTT GGCGATTGAG GGAACTCAGT TTAAGGTGCC AGCGATCTAG
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| Protein sequence | MSILLEAVTR AKQQELESDL DPVLTPRAQY DNFSKPKNNT LMLSLIVIIL SLLVVIVWLA
TSHFSSGNTP SVQVSSEART PEGHSSVPLS TDGQLKGSAE VEKNRSASGD NDVKLAGKVA
LPLAMALPTK SVVVESRYPK AVPVQQRRVQ HEKVSAVEVA QLNPESEPSS VAEEPIILGA
NSNHRGQEVL DALKYQVDEA ASELGMNKAP VQSDTPEQKE QYQSKNNLLA AFEAALKEVE
VEKSVASPVT EPKLDPIPTP KADDLPKYGQ LPAGLQLQVP EFNINAHVYS SAPDNRWLNV
DGAELQQGDM IGGKLEIIEI RPRDVVLAIE GTQFKVPAI
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