| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1050 |
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| Symbol | |
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| ID | 5612034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1246820 |
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| End bp | 1247377 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931898 |
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| Product | putative adenylate cyclase CyaB |
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| Protein accession | YP_001472789 |
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| Protein GI | 157374189 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1437] Adenylate cyclase, class 2 (thermophilic) |
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| TIGRFAM ID | [TIGR00318] adenylyl cyclase CyaB, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATC ATTTCAAAGG CAGGTATGAG GTGGAGTTGA AGTATCGCTT AACTTCAAGA
GCTCAGTTTC TATCGCGCCT TAAGGCGATG AACCCTGAGA TCATGCTGGA AGATAATCTG
GAGCATGACA GTTATTTCGA CCTGCCGGGT GGCGAGTTAA AGGGAGAGAA CAAGAGTGTC
TGTATCCGCA ACATGCAGCC CTCGGGGATC AAGCTCTGGA TCGTAAAAGG CCCCGAAGCT
GACAGATGTG AAGCGGTGAA TATTACCGAT GATGAGAAAG CCTGCAGCAT GCTTCAAACC
ATGGGCTTTA AGCGGGTATT AGAGATGAAG AAGACCCGCA GTATTTACTT TCTGGGGGAG
TTTCATGCAA CCTTGGATCA TCTGGAAGGG ATAGGGGACT TTGCCGAGCT GGCCATCATG
ACCGACGATG AGCATAGGTT GGAAAAATAC AGAGAGCAGT TACTGGAGTT GGCAGCAACT
CTGGGGCTGG ATTCGACACA GTTGGAGACC CGCTCTTATC GGGAGTTACA GGCTAACTCG
AATAGCCATT CGGACTAG
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| Protein sequence | MTDHFKGRYE VELKYRLTSR AQFLSRLKAM NPEIMLEDNL EHDSYFDLPG GELKGENKSV
CIRNMQPSGI KLWIVKGPEA DRCEAVNITD DEKACSMLQT MGFKRVLEMK KTRSIYFLGE
FHATLDHLEG IGDFAELAIM TDDEHRLEKY REQLLELAAT LGLDSTQLET RSYRELQANS
NSHSD
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