| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1038 |
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| Symbol | |
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| ID | 5613085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1233988 |
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| End bp | 1234920 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931886 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472777 |
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| Protein GI | 157374177 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2035] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.246357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.714763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATACC TGCTTATTTA CCTGAAAGGC ATGGCGATGG GCGCCGCTGA TGTTGTTCCC
GGTGTATCCG GTGGCACGAT TGCATTTATC ACAGGTATTT TAGATACCCT GTTGGAGAGT
ATTCGCCGTA TTAATCCGAC CATAATCAAG GTGGTTAAGG AGAAAGGTAT CAAAGGCGCC
TTCATGCATA TTAATGGCCC TTTTCTTGTC TGTGTCTTCG GCGGTATTTT AACCAGCATC
TTTACTTTAT CAAAAGTCAT CTCTTATCTA CTTGTTACCC ACCCGGTTCC TGTTTGGTCC
TTCTTCTTTG GGCTTATCTT GATCTCGGTC GTTCATATGC TTAAACAGGT AAAAAGCTTC
TCTATGGTTC GGGTAGTACT ATTTGGGCTT GGTGTCCTAT TTGCCTGGGG GATCACCATG
TTGAATCCTA TTTCGTTGGA GATGACTTAC CTGAATGTGT TTATCGGAGG GAGCATTGCT
ATCTGTGCCA TGTTGCTACC GGGGATCTCC GGGAGTTTTA TTCTACTGCT ACTGGGTCTT
TATCCTTCGG TACTCGCAGC GGCCAAAAAT TTAGACATCA CAGTGCTCGC CATCTTCGCA
TCGGGTTGCG TCGCGGGCTT ACTGACCTTC AGCCATCTAT TGTCGGCGCT ACTGAGAAAG
TACCACGATG CGACACTTAT CTTCCTGACT GGCTTGATGT TAGGTACGTT AGGCAAGATC
TGGCCCTGGA AAGAGGTGCT TACCTGGCGC AGTAACTCCA AAGGTGAACA GGTGCCCTTG
TTGGAGCAGA ATCTGTCACC GATGCAGTTT GAACAGTTAA CGGGCCAGCC TGCCCATATT
GCATGGGCCG TTGGCGCGCT TTTGTGTGGC ATCTTGTTGG TGTGGGGGCT GGAGCAGTTT
GCCGCACGCA GTGGCGTGGG CAGCGAGGAT TAA
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| Protein sequence | MKYLLIYLKG MAMGAADVVP GVSGGTIAFI TGILDTLLES IRRINPTIIK VVKEKGIKGA
FMHINGPFLV CVFGGILTSI FTLSKVISYL LVTHPVPVWS FFFGLILISV VHMLKQVKSF
SMVRVVLFGL GVLFAWGITM LNPISLEMTY LNVFIGGSIA ICAMLLPGIS GSFILLLLGL
YPSVLAAAKN LDITVLAIFA SGCVAGLLTF SHLLSALLRK YHDATLIFLT GLMLGTLGKI
WPWKEVLTWR SNSKGEQVPL LEQNLSPMQF EQLTGQPAHI AWAVGALLCG ILLVWGLEQF
AARSGVGSED
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