| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1030 |
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| Symbol | |
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| ID | 5610205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1226635 |
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| End bp | 1226970 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931878 |
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| Product | cold shock DNA-binding domain-containing protein |
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| Protein accession | YP_001472769 |
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| Protein GI | 157374169 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3326] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00724956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.608674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATAG CCACCGCACT GTTTCAGCAG ATGTTGCCCT ATCATATAGC CCCCTTCTAC
CTCATAGTTA GCGGCTTCAC CTTTATCGCT TATGCTCTTG ATAAGTCCGC AGCACGTAAG
GGGAACTGGC GCACCAAAGA GAGCACACTG CAGCTGATGG CGCTTATTGG TGGCTGGCCC
GGGGCGCTGC TGGCCCAGAG GTGGCTTAGG CATAAATCTC AGAAAATGAG TTTTCGAATA
ACCTTATGGT TAATGATTGC TTTAAACAAC GGCACCTTGT TATGGCTTCT CTCATCGAAG
GGACAAACAC TACTGCATCA GGTTAAATTA CTTTAA
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| Protein sequence | MLIATALFQQ MLPYHIAPFY LIVSGFTFIA YALDKSAARK GNWRTKESTL QLMALIGGWP
GALLAQRWLR HKSQKMSFRI TLWLMIALNN GTLLWLLSSK GQTLLHQVKL L
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