Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1019 |
Symbol | |
ID | 5609946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 1212556 |
End bp | 1213041 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640931867 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001472758 |
Protein GI | 157374158 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.171032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.127831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTTC GAAGTATAAC TTCTGCGGAT TGGAATGAGA TATTACTGAT CCAAGAAGAG TGCTACCCGC AAATTGAACC CGAATCGCTA GAAGTATTGC AGAGTAAATG GCTGGTTTCA CCGCAAACTT GCTTCGTTAT GGAGTCTGAT AGGCAGGTCG TTGGATATTG CCTCGCCCAC CCTTGGGTTG CCGACTCTCC ACCTTCACTT GAACAAGTTC TGGTGGCTGC GACAGAGCCC GATACCCTGT ATCTGCATGA CATAGCCCTG TCATCGAAAG TGCAGGGACA AGGGGCGGGG AAACTGGCCT TTCAGGCCTT AGTCCAGCAC GCCAAAAACC TTGCCCTACC CTGTATCTCT TTGGTGGCAG TGCAAGGTGC GGATAGTTAC TGGCGCAGAC GGGGCTTTAT CGCTCAGCCC ATAGAGAAGA GCCTAGAGAG CTACACTCCT GATGCCTGCT ATATGGTGCT GGCACTAAGC TCTTAA
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Protein sequence | MRLRSITSAD WNEILLIQEE CYPQIEPESL EVLQSKWLVS PQTCFVMESD RQVVGYCLAH PWVADSPPSL EQVLVAATEP DTLYLHDIAL SSKVQGQGAG KLAFQALVQH AKNLALPCIS LVAVQGADSY WRRRGFIAQP IEKSLESYTP DACYMVLALS S
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