Gene Ssed_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1019 
Symbol 
ID5609946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1212556 
End bp1213041 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content51% 
IMG OID640931867 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001472758 
Protein GI157374158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.171032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.127831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTC GAAGTATAAC TTCTGCGGAT TGGAATGAGA TATTACTGAT CCAAGAAGAG 
TGCTACCCGC AAATTGAACC CGAATCGCTA GAAGTATTGC AGAGTAAATG GCTGGTTTCA
CCGCAAACTT GCTTCGTTAT GGAGTCTGAT AGGCAGGTCG TTGGATATTG CCTCGCCCAC
CCTTGGGTTG CCGACTCTCC ACCTTCACTT GAACAAGTTC TGGTGGCTGC GACAGAGCCC
GATACCCTGT ATCTGCATGA CATAGCCCTG TCATCGAAAG TGCAGGGACA AGGGGCGGGG
AAACTGGCCT TTCAGGCCTT AGTCCAGCAC GCCAAAAACC TTGCCCTACC CTGTATCTCT
TTGGTGGCAG TGCAAGGTGC GGATAGTTAC TGGCGCAGAC GGGGCTTTAT CGCTCAGCCC
ATAGAGAAGA GCCTAGAGAG CTACACTCCT GATGCCTGCT ATATGGTGCT GGCACTAAGC
TCTTAA
 
Protein sequence
MRLRSITSAD WNEILLIQEE CYPQIEPESL EVLQSKWLVS PQTCFVMESD RQVVGYCLAH 
PWVADSPPSL EQVLVAATEP DTLYLHDIAL SSKVQGQGAG KLAFQALVQH AKNLALPCIS
LVAVQGADSY WRRRGFIAQP IEKSLESYTP DACYMVLALS S