| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1011 |
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| Symbol | |
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| ID | 5609622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1203137 |
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| End bp | 1204327 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931859 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_001472750 |
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| Protein GI | 157374150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT CAAATCGTTT CGCCTCTATC CGCTCCACTA AAAAAACCAT TACTACACAG
CAAGCTAATC CTAATTCGGT CGTCGAGCAC TCTGTTGGTA GAGAAACTGT TGGTAGAGAA
ATCGCTGACA GTGATCCTAC TGTCGAGCAT GTAAGCGACT TAAGCCTGTC ACGGCTGGGT
TGGCGTGCGA CATTTCAGCG TCAGTTAGCG AGTCTGGAAT TTCAAGGTGG AAGAGCGGCG
CGAGTCTCTG CCCATCATCG TGGCCAGTAC GGCTTGTTGA CTGAGCAGGG TGAAACCAAC
TTAGCCATCA AAAGCGATCT CCCGCCTATG ACTGTGGGAG ACTGGTTACT GCTCGATGAG
CAAGAGCGCT TTTTACACCT TTTTGAACGT GATTCGCTCT TTAGTCGTAA GGCGGCGGGG
AGTCGGTCTG AAAGGCAACT GATCGCATCG AATCTGGACT GGGTATTTAT CGTCTCATCG
CTCAATCACG ACTTTAATAT CAACCGTATC GAGCGATATC TGGCGCTGGT CAATGACGCT
AAAGTCACAC CTGTAGTCGT GCTGACCAAG CGAGATCTCT GCGATGATAT TAGTGCTTAT
ACCGAGCGGC TCAGGGCGCT GGACAGCAAC TTACTCATCG AAACCGTTAA TGGTCTCGAT
AGTGACAGCG TGCAGGCGCT CGAGAGTTAC TGCAGCAATG GTAAAACGGT GGCGCTGATA
GGCTCATCCG GTGTCGGTAA GTCGACTCTG GTTAACAGTT TACTGGGTCA GAGTGAGCAG
AGCACTTCAG GCGTTCGGAC TGATGACAGT AAGGGGCGAC ACACAACCAC GGGACGCTCC
CTGCATCTGA TGCCAAGTGG TGGTCTATTG CTAGATACGC CGGGGATGCG CGAGCTACAG
TTGGCAGATT GCGAAGATGG AGTGAATGAC ACCTTCTCTG AGCTGGTTAG CTTAGCCGAG
CGGTGCCGCT TTGGTGATTG CCAGCATCAA GAGGAGCCGG GCTGTGCGGT TCAAGCGGCT
ATCTTATCGG GCTGCTTGAG TGAGCGCCGC CTCGTGAGTT ATCAAAAACT GCTGCGCGAA
CAGGCCCTCA ATGGTGCCAG TATCGCCGAG AAGCGTGCCC AGGGACGTAG TCAGAGTAAG
CTATACAAAC GCATACAAGA TAGCTCGAGA GCCAATAAAC GCGGCGAGTG A
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| Protein sequence | MTKSNRFASI RSTKKTITTQ QANPNSVVEH SVGRETVGRE IADSDPTVEH VSDLSLSRLG
WRATFQRQLA SLEFQGGRAA RVSAHHRGQY GLLTEQGETN LAIKSDLPPM TVGDWLLLDE
QERFLHLFER DSLFSRKAAG SRSERQLIAS NLDWVFIVSS LNHDFNINRI ERYLALVNDA
KVTPVVVLTK RDLCDDISAY TERLRALDSN LLIETVNGLD SDSVQALESY CSNGKTVALI
GSSGVGKSTL VNSLLGQSEQ STSGVRTDDS KGRHTTTGRS LHLMPSGGLL LDTPGMRELQ
LADCEDGVND TFSELVSLAE RCRFGDCQHQ EEPGCAVQAA ILSGCLSERR LVSYQKLLRE
QALNGASIAE KRAQGRSQSK LYKRIQDSSR ANKRGE
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