| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0985 |
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| Symbol | |
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| ID | 5610262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1168034 |
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| End bp | 1169242 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931833 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001472724 |
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| Protein GI | 157374124 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.758318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC AATCTCACCT AGCATGCCGT AACCCAAAAG TAATCATGAT CTATGAAAAT
GAGGAAGATG TTCTGGGTGC GGCCAGTATC ATTGCCGATC AAGTAGAGGA ATATCGTACG
ATTCTGGTAA ACTTTGAAAT TGGTGACAAG GTAAAAAACC TTAAACCTTC TGTGATACTG
TTTGCTCTCA CAACAGTACA GAAGAGCATC GAATTATATA CAAAGCTCAT TTCAGACAAA
TTCCTGGATT ACCCTCATTA CAGTATCTTA CTCTGTAAAA ATCGTGAGTC TGCTACCGCA
TTTCGTTGTT GCATCAAAGA CATTTTCGAC AACTATTTTG TCTACCAACC TCTATATGAA
AAGTTTCGTT TAAAAATGAT CGTGCATAGT GGCTTACTCA TCAGTCAAGC AACGAGCCAT
TATGCCGGAT TACATGAGGA GCAACTCGAA AATATTGGCC AGGAGTTGGT CTCACTCATA
GATAAAAGCA GTGAATGTAA ACAATCACTG CTAGGCTCTA TAGCCATTTG TAAACAAAGT
CTGAATGAGC CTCAAAACTT AGTCGTAGAT AAAGAACTTG ATACGAACTT ATCTTCGAAA
AAACTAATGG AAAATATTAA CAAGAGCCAT GTCGAGCCCC TCCTTGCAGA GCTGGAAGAT
AACATAAAAT CCAGCCTGGA TAGCATGATA CAGCAGCTAC TCTCAAAGCA GGTCGGTATC
GAAGTATTGG AGGCTAAGTT AGCCGATCTA TCCAGAGTGC TGCCACCCGA TCGTCAGACA
GTATCGGAGG CACTATCTGA ATCATCGATG CTCACCTCTA GAGCTGAAAA TGTGGAAGTA
CAAAAACCTA AAAAAATTCT GGTCGTAGAA GACAATCAAA TATACCGTGA CATGTTGGTT
AGGGTATTGG CGAAAGAAAA CTTTCTGGTG GATGAGGCAG AAGATGGCTT AAACGCACTT
CAGAAGATTC GAAACAACCA ATATGCTCTG GTCTTAATGG ATCTGTTTAT GCCTAACCTG
GATGGCATCA ATACGACCAT ACAGATCAAA TCGGTATCAG GCGGAAAAGA GTTACCAATA
ATCGCGCTAA CCGGGAATAA AAATAAAGAG TTAATAAAGA CCTGGGCAGA GCAAGGATTA
AAAGGCTATA TTCTCAAACC ATCGACGAGA AATGAGATAC TCGAAGCCGT TAACAGAGTC
ATTAATTGA
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| Protein sequence | MTKQSHLACR NPKVIMIYEN EEDVLGAASI IADQVEEYRT ILVNFEIGDK VKNLKPSVIL
FALTTVQKSI ELYTKLISDK FLDYPHYSIL LCKNRESATA FRCCIKDIFD NYFVYQPLYE
KFRLKMIVHS GLLISQATSH YAGLHEEQLE NIGQELVSLI DKSSECKQSL LGSIAICKQS
LNEPQNLVVD KELDTNLSSK KLMENINKSH VEPLLAELED NIKSSLDSMI QQLLSKQVGI
EVLEAKLADL SRVLPPDRQT VSEALSESSM LTSRAENVEV QKPKKILVVE DNQIYRDMLV
RVLAKENFLV DEAEDGLNAL QKIRNNQYAL VLMDLFMPNL DGINTTIQIK SVSGGKELPI
IALTGNKNKE LIKTWAEQGL KGYILKPSTR NEILEAVNRV IN
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