| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0909 |
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| Symbol | |
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| ID | 5611337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1088572 |
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| End bp | 1088991 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931757 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001472648 |
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| Protein GI | 157374048 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000468924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAA GTGATATTAT GAGCACTCAA GTGGTCTGTA TTAGCCACAA GGCCAGTTTG
AAGGATGCCC ATGAGCTGAT GCAGAGCCGA GGGGTACGTC ACCTGCCTGT AATATCAGAA
TTTGATTCGA AGCTCGTCGG TATTCTTACT CATAAAAAGA TGATTAGTAC AGTGATGGCC
ATGATGCATA AATATGGCGG GAATGCGTTA GACAGAAAAG AGCGGGGACA ACTCGTTGAA
GACTTAATGG ATACCGAGTT TCAAAAACTC ACCGAAGATG AGCCCCTCTC TATCGTCGTA
GAGTACTTTA TCGAGAACAA GCTAGGCTGC CTTCCGGTGG TTGACACTCA AGGTAAGGTA
GAAGGTATCG TGTCCTCATC TGACTTCGTC AAACTATGTG CAAGCCTGTT AAAAAACTAA
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| Protein sequence | MKVSDIMSTQ VVCISHKASL KDAHELMQSR GVRHLPVISE FDSKLVGILT HKKMISTVMA
MMHKYGGNAL DRKERGQLVE DLMDTEFQKL TEDEPLSIVV EYFIENKLGC LPVVDTQGKV
EGIVSSSDFV KLCASLLKN
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