Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0877 |
Symbol | |
ID | 5613936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1044805 |
End bp | 1045869 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931725 |
Product | fructose-1,6-bisphosphate aldolase |
Protein accession | YP_001472616 |
Protein GI | 157374016 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases [TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000290228 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAA TTTCCCTACG TCAAATGCTA GATCATGCTG CAGAACATGG TTATGGCGTC CCCGCTTTTA ACGTAAACAA CCTTGAGCAG ATGCGTGCCA TCATGCAAGC TGCTGAGGCG ACCGATAGCC CTGTTATCGT TCAGGCTTCG GCAGGTGCAC GTAAGTATGC TCGTCCTCAG TTTCTTAAGT ATCTGATGGC CGCTGCACTT GAGCAGTACC CTGATATCCC TGTGTGTATT CACCAGGACC ATGGTACCGA TCCTGATATT TGTCAGCGTT CGATTCAGTT AGGCATGTCA TCGGTAATGA TGGACGGTTC ATTGATGGCA GACGGTAAGA CTCCTGCTTC ATATGAGTAT AACGTCGACG TTACCCGCAA GACGGTAGCT TTTGCTCACG CTTGTGGTGT CTCAGTTGAA GGTGAAATCG GTTGTTTGGG TAGCCTTGAA ACGGGTGAAG CCGGTGAAGA AGATGGGATC GGTGCTGCAG GTATTTTGAG CATGGACCAG ATGCTAACCA CACCTGAAGA GGCAGCGCGT TTCGTTGCCG ATACTCATGT CGATGCATTG GCTATTGCCA TTGGTACCAG TCATGGTGCG TATAAGTTTA GCCGTAAACC TACCGGCGAT GTACTGCGTA TCGACCGCAT TAAAGAGATC CACGCGCGTA TTCCTAACAC TCACCTGGTG ATGCATGGTT CTTCATCGGT ACCTCAGGAG TGGCTCAAGG TCATCAATGA GTACGGTGGT GAGATGCCTG AAACTTACGG TGTTCCTCTA GAGGAGATCG TTGAAGGTAT CAAGCATGGC GTTCGTAAGG TCAATATCGA TACCGATCTG CGCTTGGCAT CTACGGGAGC TGTGCGTAAA TTCCTTGCAG AAAACCCAAG TGAATTTGAT CCACGTAAAT TCCTTAAGGC GTCTATGGAA GCGATGGCTG ACATCTGTAC TACGCGCTAT GAAGCCTTTG GTTGTGCCGG CATGGGCTCT AAGATTAAGC CTAAGTCACT GCAGGCTATG TATAAAGCAT ACCAGTCAGG TGAACTTGAT CCGCAGATTA AATAA
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Protein sequence | MALISLRQML DHAAEHGYGV PAFNVNNLEQ MRAIMQAAEA TDSPVIVQAS AGARKYARPQ FLKYLMAAAL EQYPDIPVCI HQDHGTDPDI CQRSIQLGMS SVMMDGSLMA DGKTPASYEY NVDVTRKTVA FAHACGVSVE GEIGCLGSLE TGEAGEEDGI GAAGILSMDQ MLTTPEEAAR FVADTHVDAL AIAIGTSHGA YKFSRKPTGD VLRIDRIKEI HARIPNTHLV MHGSSSVPQE WLKVINEYGG EMPETYGVPL EEIVEGIKHG VRKVNIDTDL RLASTGAVRK FLAENPSEFD PRKFLKASME AMADICTTRY EAFGCAGMGS KIKPKSLQAM YKAYQSGELD PQIK
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