| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0870 |
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| Symbol | |
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| ID | 5611444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1033432 |
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| End bp | 1035081 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931718 |
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| Product | putative fumarate reductase flavoprotein |
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| Protein accession | YP_001472609 |
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| Protein GI | 157374009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3573] Predicted oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGCAG CTGGTAAGAG AATGAGACAA GCTGAAAATT ATCAATGCGA TACAGTCATC
GCCGGAGCCG GTGTCGCTGG TCTGGTTACG GCTCTCGAAT TACTCGAGCA TGGGCAGACA
GTCTATCTTG TCGACCGTGA TACTCCGGAG AGGATCGGTG GCCTGGCCAG GTGGGCATTC
GGTGGCATGG CATTGTCCGG AACCCCTCAG CAAAGGCAGA TGAATATCCA CGACGACTCG
ACCCTTCTGC TTCGGGATTG GCACAGTTTT GCCGAATTTG GTGAAGGTGA TATCTGGCCT
AAGGCTTGGG CAAAAGAGTA TGCCGAACAT AATAATGAAA AGGTCTATCG GTGGTTAACT
CACTTGGGTC TGAAGTTTTT GCCTGCGGTT AACTGGGTGG AGCGAGGGTT ATTTGTCCCC
GGTAATTCAG TGCCCCGGTA TCATGTGCTG TGGGGGACAG GCAGGGAGTT AGTAGAGACC
ATAATGGTTA AGTTGGCCCC CTATATCAGA CAGGGAAAGC TCGATATTTT TTACCGACAT
AAGGTTGTGC GCCCCATTAA TGATGAGGGG GCCGTCGTCG GCATAGAAGT TGAAAATGAA
CAGAGCAAGG CTATTTTTTC GATCTCAGCC TCTCATATCG TCATTGCCTG CGGTGGTATC
AATGGCAGCA GTGAAAGGGT GAAACAAAAC TGGAATGTCC CATGGGAAGA GGTGCCAGAG
ACGCTGTTAA ATGGTGCCAA CCCCATCTCC GATGGCCTGC TTCATGACGA GGTTGAGGCA
CTGGGAGCTC GGGTAACTCA TGTCGATAAG ATGTGGAATT ATGCGGCTGG AATCGCACAT
CCTCAGGCAG AATTTGAGGG GCATGGTCTA AGCTTGATTC CCTGTAAATC AGCCCTGTGG
CTCGATCACC TTGGAAGGCG AATAGGTCCA CAACCTCTGG TTACCGGGTT CGACACTCAC
TATCTGTGTC GGCAGGTCGC AAGGCAGAGT AAGCCCTGGA CCTGGCAGGT ATTGAACTGG
ACCATAGCCG TGAAAGAGTT GGCGGTATCG GGGGCTGAGC ATAACCCTTC GATCAGAGAT
AAAAAAATAT TCAGCTTTCT CAATGAGATA TTGTTCGGTA ATCACCGCTT AGTGGAAGAG
TTGGCGGAGC AATGTGAAGA TTTCATCTGT GCCGACACAC TCGATGACCT GACGCATAAG
ATGAACCTCC TGACAAAGCA AAGCTATATC GATAGTGTAG ATTTGGCGCG AGAGATAACT
CTGTACGATC AACGAACGGT CGATACCCGG TTGCAAAATG ATGAGCAGCT AAGACGTATT
AACCATGCCA GACAATGGAG GCCCGATAGG TTGCGAACCC GTAAACCCGG ACCTATCTTG
TCGGTGGGAA CGGGAAAGAG AGATAAGCTT ATTGCCATCA GGCTTAAGTT GATTAGCCGT
AAGAGCCTTG GTGGGGTACA GACTAACTTA TCCAGCCAGG TACTGGATCG GCAAGGCGAG
CCCATTGTGG GTTTATATTG TGTCGGCGAG GCCGCTGGGT TTGGTGGCGG CGGTGCCAAC
GGGGTTCGCT CTTTAGAGGG AACATTCCTG TCGGCTTGTA TCTTAACGGC CCGCAATGCG
GCGGCTGCGA TTATCGACAG TCATAAATAA
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| Protein sequence | MLAAGKRMRQ AENYQCDTVI AGAGVAGLVT ALELLEHGQT VYLVDRDTPE RIGGLARWAF
GGMALSGTPQ QRQMNIHDDS TLLLRDWHSF AEFGEGDIWP KAWAKEYAEH NNEKVYRWLT
HLGLKFLPAV NWVERGLFVP GNSVPRYHVL WGTGRELVET IMVKLAPYIR QGKLDIFYRH
KVVRPINDEG AVVGIEVENE QSKAIFSISA SHIVIACGGI NGSSERVKQN WNVPWEEVPE
TLLNGANPIS DGLLHDEVEA LGARVTHVDK MWNYAAGIAH PQAEFEGHGL SLIPCKSALW
LDHLGRRIGP QPLVTGFDTH YLCRQVARQS KPWTWQVLNW TIAVKELAVS GAEHNPSIRD
KKIFSFLNEI LFGNHRLVEE LAEQCEDFIC ADTLDDLTHK MNLLTKQSYI DSVDLAREIT
LYDQRTVDTR LQNDEQLRRI NHARQWRPDR LRTRKPGPIL SVGTGKRDKL IAIRLKLISR
KSLGGVQTNL SSQVLDRQGE PIVGLYCVGE AAGFGGGGAN GVRSLEGTFL SACILTARNA
AAAIIDSHK
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