| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0759 |
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| Symbol | rpsR |
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| ID | 5611096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 903315 |
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| End bp | 903542 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640931603 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001472498 |
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| Protein GI | 157373898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000223269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CTGCAGAAGG TGTTACAGAG
ATCGATTACA AAGATATCGT AACTTTGAAG AACTATATCA CTGAAAGTGG TAAAATTGTT
CCTAGTCGTA TCACTGGTAC AAATGCTAAA TATCAACGTC AACTAGCTCG CGCTATCAAG
CGTGCTCGTT ATCTTTCTCT ACTGCCGTAC ACTGATCTTC ATCAGTAA
|
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| Protein sequence | MARYFRRRKF CRFTAEGVTE IDYKDIVTLK NYITESGKIV PSRITGTNAK YQRQLARAIK
RARYLSLLPY TDLHQ
|
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