| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0715 |
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| Symbol | |
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| ID | 5612001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 862023 |
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| End bp | 862451 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931559 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472454 |
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| Protein GI | 157373854 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2246] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.039698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCACA TAGGAGTTAT ATTCAGCAGA GTCAGATCGT GTCTGACTCT TACTCAGCTG
AAGTTTTTAA TGGTGGGAGG AGTGAGCTTT ATTGTCGATA TGCTGCTATT TATCTACCTG
TCTCAAAAAC TGGAGTGGCC TATTCTGCAT GCAAGGCTGA TCGCTTTTAG TGTGGCACTG
ACGTTAACTT GGCTGGGCAA CAGGCTATTT ACCTTCTCTC ACCGAAAGAA AGTGGCCAAG
GGGCAACAGT TTGTGATGGC CGTTATTCTT GCCTGCAGTG CCGCCTCAGT GAACCTTAGC
GTTTTTTACC TGTTGAGTGA GCTGAGCAGG CCCGCCGGGT TTACTGCCAC CTTTTATCTG
GCGTTAGGCG TGCTGTCGGG ATTGGTCGTA AATTGGCTTG GGTCTAACTA CCTTGTATTT
CGTCATTAA
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| Protein sequence | MRHIGVIFSR VRSCLTLTQL KFLMVGGVSF IVDMLLFIYL SQKLEWPILH ARLIAFSVAL
TLTWLGNRLF TFSHRKKVAK GQQFVMAVIL ACSAASVNLS VFYLLSELSR PAGFTATFYL
ALGVLSGLVV NWLGSNYLVF RH
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