| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0699 |
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| Symbol | |
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| ID | 5612244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 842321 |
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| End bp | 843217 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931543 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001472438 |
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| Protein GI | 157373838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
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| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.971561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCT TGATAGGCTA TTGGGGCAAG CTGTGTGCCT TTTTATTAAT TAGTATCGTA
CTGATATTAA TCGGTTTTAT CTTGATTAAG GGCTTGCCGA CATTAGAGCA GCCACTCTTT
TTCGGTGATA CGGCGCCACT GGCCGCAATG ATGGGGCTAC AGCCTGTATG GGAGGGCATA
TGGCCTGCCT GTGTAGGCAC TCTCACCGTG GTCTTATGTG CGGTTTCTTT GGCTTCGGTG
CCGGGAATTG CAAGTGGTAT TTGGCTTGCG AGTGCGCCAG ACAAGCCCGC TCAGAAAGTG
TTTGGTTTGG CGGTCGATAT CCTGGCTGGG ATCCCGTCTA TTCTTATGGG GTTATTTGGT
TTTAGCCTGA TTTTACTTCT GCGGGGGAGT TTCTTTCCTC AGGCTAATGC AAGCCTCCTG
CTTGCGTCGT TCTGTTTAGC CCTGCTTATT CTTCCCTATA TCGCCTGCGC GACGCAAAAT
GCCCTGAGCT GCTTGTCAAA ACAGTTGTCG GTTACGGGAG CGGCCTTAGG TATGACTCAA
TGGCAAGTCA CCTATCGTTT GCTACTGCCG CAAGCCAGCT CAGGAATAAT GAGTGGACTC
ATGCTGGCGA TAGGCAGGGC GGCTGAAGAT ACTGCCGTGA TCATGTTAAC GGGCGCCGTT
GCAAATGCAG GCTTACCCGG TGGATTACTG CAGCGATTCG AAGCGCTGCC ATTCACGATT
TTTTATTACA GTGCTCAGTA TCAATCACAA CAAGAGTTGA ATATGGCTTT CGGCGCGGCG
TTAGTCCTGC TTACCTTGAC CAGTATTATC TTTACCCTGC TTGCTGCTAT CGTCAGTCGT
CGCAACCGCA ATATATTTGG ATCTGCAAAG AGCATTAAAA AGGAGTCTAT ATGTTAG
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| Protein sequence | MSRLIGYWGK LCAFLLISIV LILIGFILIK GLPTLEQPLF FGDTAPLAAM MGLQPVWEGI
WPACVGTLTV VLCAVSLASV PGIASGIWLA SAPDKPAQKV FGLAVDILAG IPSILMGLFG
FSLILLLRGS FFPQANASLL LASFCLALLI LPYIACATQN ALSCLSKQLS VTGAALGMTQ
WQVTYRLLLP QASSGIMSGL MLAIGRAAED TAVIMLTGAV ANAGLPGGLL QRFEALPFTI
FYYSAQYQSQ QELNMAFGAA LVLLTLTSII FTLLAAIVSR RNRNIFGSAK SIKKESIC
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