| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0691 |
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| Symbol | |
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| ID | 5612268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 833448 |
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| End bp | 834122 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931535 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001472430 |
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| Protein GI | 157373830 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGTTC TCCTCGTCGA AGATAATCGC CTGTTGGCCA AGAATATTAT TCATTATCTG
GAGCTAAACG AGATCGAGTG TGATTATGCC GAGACACTCG CTCAGGCCGA ACTGGCCATA
TTCAGTCGTA CCTTCGATGC GATAATACTC GATCTTAACT TGCCCGATGG CGATGGAATT
ACCGCATGTA AAAAATGGAA AGAGCAACGC ATTATTTCAC CTATCATCAT GCTGACGGCG
CGGAGTAACC TGCAGGACAG ACTGTCGGGT TTTGAGGTCG GTGCCGATGA CTATCTGGTG
AAGCCTTTTG CCATGGCTGA GTTAGTTGCG CGTCTTAGGG TCGTCTCTCA GCGACGTCCA
TCCCCCAAGT TACTCTCAAT CGGGGAGCTT GAATTAGATT TTGCCGGGCA CCATGCTCAT
AGGCAGGGAC AGTTATTGAC ATTATCTCGC ACGGGATGGC AGATCCTTAC TCTATTGGCC
CGCAGGAGCC CTGAAATAGT TGAGCGGGAA GAGATTGAGC GATTGCTATG GCCTGATAGT
CTGCCCGATA GTGATAGCTT ACGTAGCCAC ATTCATCTGC TGCGTAAAAT TGTCGATAAG
CCATTCGAGC AGAAGCTTAT CCACACAATT CGAGGGGTAG GCTTATGTCT AAAGGTAGAT
ACAGATGAAA CCTAA
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| Protein sequence | MLVLLVEDNR LLAKNIIHYL ELNEIECDYA ETLAQAELAI FSRTFDAIIL DLNLPDGDGI
TACKKWKEQR IISPIIMLTA RSNLQDRLSG FEVGADDYLV KPFAMAELVA RLRVVSQRRP
SPKLLSIGEL ELDFAGHHAH RQGQLLTLSR TGWQILTLLA RRSPEIVERE EIERLLWPDS
LPDSDSLRSH IHLLRKIVDK PFEQKLIHTI RGVGLCLKVD TDET
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