Gene Ssed_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0675 
Symbol 
ID5612825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp815282 
End bp815836 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID640931519 
Producthypothetical protein 
Protein accessionYP_001472414 
Protein GI157373814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AAATATTTGC TGCGATAGCG GCCTTGAGTC TGACTCAATG TACAAGTTTA 
AACCTGGAAC AATGTAAACA TTCCGACTGG TACTCCTTAG GCATGACCGA CGGAAACAGC
GGATCGGCAT CTTCAACTCT AAATGGATAC ATAGAGGACT GTCGCGAATT TGGTCTGGGC
GTGAATACCG AGCAGTGGAC TGCCGGTTAC CGGGCGGGAC TTGAGAACTA CTGTCAGCCA
GAAAATGGTT ACAAACTAGG CTTGCAGGGT TCTTACTACA ACGGGGTCTG TGCTAATAAC
GAATTCGTTA AACGTTACAA CGAAGGCCAT CGTCAATTTG AGATCAAAAA TAAGATCGCC
AGAATTCAAT CCCGGCTCAA AGATATCGAG CGTGAACTTA CCCAGGTCAA TAAGAAGATC
CATGCCAAAC AGGATGTGGC GAGTAATAAA GAGGATAAAA AAAGCCTTAA GAACGAAAGG
CATGATCTGG AAAAGGAATT GATGCTGCTG CGCATAGGCG CCGCCGATAT CCTCCCCATC
CAGCTTCTTT TTTAA
 
Protein sequence
MKFKIFAAIA ALSLTQCTSL NLEQCKHSDW YSLGMTDGNS GSASSTLNGY IEDCREFGLG 
VNTEQWTAGY RAGLENYCQP ENGYKLGLQG SYYNGVCANN EFVKRYNEGH RQFEIKNKIA
RIQSRLKDIE RELTQVNKKI HAKQDVASNK EDKKSLKNER HDLEKELMLL RIGAADILPI
QLLF