Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0675 |
Symbol | |
ID | 5612825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 815282 |
End bp | 815836 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931519 |
Product | hypothetical protein |
Protein accession | YP_001472414 |
Protein GI | 157373814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA AAATATTTGC TGCGATAGCG GCCTTGAGTC TGACTCAATG TACAAGTTTA AACCTGGAAC AATGTAAACA TTCCGACTGG TACTCCTTAG GCATGACCGA CGGAAACAGC GGATCGGCAT CTTCAACTCT AAATGGATAC ATAGAGGACT GTCGCGAATT TGGTCTGGGC GTGAATACCG AGCAGTGGAC TGCCGGTTAC CGGGCGGGAC TTGAGAACTA CTGTCAGCCA GAAAATGGTT ACAAACTAGG CTTGCAGGGT TCTTACTACA ACGGGGTCTG TGCTAATAAC GAATTCGTTA AACGTTACAA CGAAGGCCAT CGTCAATTTG AGATCAAAAA TAAGATCGCC AGAATTCAAT CCCGGCTCAA AGATATCGAG CGTGAACTTA CCCAGGTCAA TAAGAAGATC CATGCCAAAC AGGATGTGGC GAGTAATAAA GAGGATAAAA AAAGCCTTAA GAACGAAAGG CATGATCTGG AAAAGGAATT GATGCTGCTG CGCATAGGCG CCGCCGATAT CCTCCCCATC CAGCTTCTTT TTTAA
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Protein sequence | MKFKIFAAIA ALSLTQCTSL NLEQCKHSDW YSLGMTDGNS GSASSTLNGY IEDCREFGLG VNTEQWTAGY RAGLENYCQP ENGYKLGLQG SYYNGVCANN EFVKRYNEGH RQFEIKNKIA RIQSRLKDIE RELTQVNKKI HAKQDVASNK EDKKSLKNER HDLEKELMLL RIGAADILPI QLLF
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