Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0666 |
Symbol | |
ID | 5613119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 807005 |
End bp | 807337 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640931510 |
Product | hypothetical protein |
Protein accession | YP_001472405 |
Protein GI | 157373805 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTATCT TGATTCAAAT GGTATTCATG GTTGGCTTGG TGGCTTGGTG GCTTGGTGGC TTGGTGGCCT GTGGTGGAAG TGAGAGTTCG CAGCAAGAGG CTGAAACTGA TACACCGGCG GGGACAGTAA TCACGGCGGT GACTGGGGTG AGCCTTTCAT TAAATGATTC AACAATTGAG CTTGGTTCGA CCCTGTCGTT AACGGCGAGT GTGTTGCCTA GCGATGCGTC AAATCAAGCT GTTACTTGGG AGTCCAGTGA CAGCAATGTC GCTGGTGTTG ATGTCAAGGG GGGGTTACGG CCCATACTGC CGGTAGCGCT AAGATCACTG TGA
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Protein sequence | MVILIQMVFM VGLVAWWLGG LVACGGSESS QQEAETDTPA GTVITAVTGV SLSLNDSTIE LGSTLSLTAS VLPSDASNQA VTWESSDSNV AGVDVKGGLR PILPVALRSL
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