Gene Ssed_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0666 
Symbol 
ID5613119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp807005 
End bp807337 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID640931510 
Producthypothetical protein 
Protein accessionYP_001472405 
Protein GI157373805 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTATCT TGATTCAAAT GGTATTCATG GTTGGCTTGG TGGCTTGGTG GCTTGGTGGC 
TTGGTGGCCT GTGGTGGAAG TGAGAGTTCG CAGCAAGAGG CTGAAACTGA TACACCGGCG
GGGACAGTAA TCACGGCGGT GACTGGGGTG AGCCTTTCAT TAAATGATTC AACAATTGAG
CTTGGTTCGA CCCTGTCGTT AACGGCGAGT GTGTTGCCTA GCGATGCGTC AAATCAAGCT
GTTACTTGGG AGTCCAGTGA CAGCAATGTC GCTGGTGTTG ATGTCAAGGG GGGGTTACGG
CCCATACTGC CGGTAGCGCT AAGATCACTG TGA
 
Protein sequence
MVILIQMVFM VGLVAWWLGG LVACGGSESS QQEAETDTPA GTVITAVTGV SLSLNDSTIE 
LGSTLSLTAS VLPSDASNQA VTWESSDSNV AGVDVKGGLR PILPVALRSL