| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0664 |
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| Symbol | |
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| ID | 5613118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 804844 |
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| End bp | 806475 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640931509 |
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| Product | Signal transduction histidine kinase-like protein |
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| Protein accession | YP_001472404 |
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| Protein GI | 157373804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCT TTCAGAATAA TTTACGGTTT CAGATAATAT TCCCACTTTC ACTTATTATG
GCGGTTATGT TAGCTGTGCT TAGTTTTTCT ATTCCAATAC TGGTTAAAAG AAATGCAGAG
CAACATGCAA TACATACAGC GCTTAACTCC TTAAAACAAA TGAAAGTATT ACGTGCTTAT
TATACCAAGA ACATAGTTAA GAAAGTGCAA GAGTTTGGCG TATTAAAGCC GGCGATTAAG
CACTTAGGCG AGCCTGATAA AATTCCTCTG CCAGCAACCA TGATTCACGA TTTAAGCCAA
TTGTTTGATG AAGATGGGAG TAAATTGAGC TTATACAGCG CTTACCCATT TCCTAACCGT
CAACATATTG CACTTGACCC TTTTCAACAA AAAGCTTGGT TAAGACTCAA TGATAATCCG
AGCCAAATAA TTAGTGCCGT AAATAATATA AATAGTCATA CGATATTAAG AGTCGCGATT
TCTGATCAAA TGCAAGTTCA AGCTTGTGTG GATTGTCATA ATAACCATCC ACTAACGCCT
AAAGCTGACT GGCAGATAGG TGATGTACGT GGCGTATTAG AGATGAGTAT AGATATTTCA
TCACAGCTTG CCTTAGCAAA TACATTAAGT TTATGGATAA TTTCATGCAT GCTCATTGCA
TGTATATTAC TGATCATACT CTTTTATTTT TTAACGGGAA AAATAACTGA ACAAGTGAGT
AATATCTCTC AAGGCATGAT TGCTCTTGGT AAAGGCAATT ATGAAATAGA GCTCCCTCAA
GACTCTACCA CCTTAGAAAC ACATCAAATG TACACGGCAT TTAAACTGTT TAAAACTGCG
CTATTAGAAC GTCAAGCTCT TGAAAATCAG CAACAAGTAT TTGAAACAGA AAAAGTCAAT
TCATTGGGTA GAATGGTAGC CAGCATTGCT CATGATGTGA ATACCCCCAT AGGTATTAGC
GTTACCGCAA CGGGATTTTT GCAAGATGAA ATTGAATTAT TAGCCAAGAA ATTTGCCTCT
GGGGAGTTAA ATGAAGAGGA CTTTGAGAGC TTTTTAGCGT CGAGTCAAAG TTCAATGACA
ATTTTATCTC GAAATTTATC TTCAGCGGCA GATCTCATTC GCAGCTTTAA ACAAGTATCG
GTTGATCAGA TGAGTGAACA AGCGCGAGAA GTATTGATAT CCGAATACTT CAAAGAGGTC
ATTCACAGCA TGTTGCCTAA AACTAAAAGA GCACAAGTGA CGGTTGATTT AGACTGTGTT
GAGGATCGCG CTTGCTTTAT TTTTCCGGGT TTATTATCTC AAGTGATAAC TAACTTGATA
AGCAACTCCA TTATCCACGG CTTTCCAGAA CAAAATGGTG GCTCGATTAC GCTTGTGGTA
TCAGCACAGG AGCATGAAGT TAGCATACAC TATCGTGATA ATGGTATTGG TATTAGCGAC
GATATTCTGC CAAAGGTGAT GGACCCCTTT TTCACCACTA ATAGAGATGA AGGAGGCAGC
GGGCTAGGAT TAAGCATTAT TCACAATATC ATCACTCAAA AACTCAATGG TCATATCAAG
CTAACCAGTG GGCTAGGTAA AGGACTAACA GTGGATATCT CTTTTCCCGT GTTACAAGCA
GCAGCTAATT GA
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| Protein sequence | MSFFQNNLRF QIIFPLSLIM AVMLAVLSFS IPILVKRNAE QHAIHTALNS LKQMKVLRAY
YTKNIVKKVQ EFGVLKPAIK HLGEPDKIPL PATMIHDLSQ LFDEDGSKLS LYSAYPFPNR
QHIALDPFQQ KAWLRLNDNP SQIISAVNNI NSHTILRVAI SDQMQVQACV DCHNNHPLTP
KADWQIGDVR GVLEMSIDIS SQLALANTLS LWIISCMLIA CILLIILFYF LTGKITEQVS
NISQGMIALG KGNYEIELPQ DSTTLETHQM YTAFKLFKTA LLERQALENQ QQVFETEKVN
SLGRMVASIA HDVNTPIGIS VTATGFLQDE IELLAKKFAS GELNEEDFES FLASSQSSMT
ILSRNLSSAA DLIRSFKQVS VDQMSEQARE VLISEYFKEV IHSMLPKTKR AQVTVDLDCV
EDRACFIFPG LLSQVITNLI SNSIIHGFPE QNGGSITLVV SAQEHEVSIH YRDNGIGISD
DILPKVMDPF FTTNRDEGGS GLGLSIIHNI ITQKLNGHIK LTSGLGKGLT VDISFPVLQA
AAN
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