Gene Ssed_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0636 
Symbol 
ID5611849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp774472 
End bp774825 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content50% 
IMG OID640931481 
Producthypothetical protein 
Protein accessionYP_001472376 
Protein GI157373776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CCATTAAGGC CGCACTCATC TCGGCCTTTG TCTGCCCCGG CGGCGGTCAC 
TTTTACCTGA AACAATACAC CACGGGGACA CTTATCTCGG TCGCCATGCT CAGTGGATTG
TTATACCTGC TCAATCAGGC CGTCGAAAGG GCCCATCAGA TATCCGATAG AATTTTAAGC
GGTGAACTAC CGCTGGACCT CAGCGTCATC TACCCATTGA TCACGCAAGC CCCCCCTCCT
TCTCAAGCAA GTATGATTAA TATCGCCACC ATGGTATTTA TCTTTGCCTG GTTTGTGGGG
GTCATAGACT CTTATCGATT GGGTCATGGA ATGGATAAAG CTGAACAAGC CTAG
 
Protein sequence
MNKAIKAALI SAFVCPGGGH FYLKQYTTGT LISVAMLSGL LYLLNQAVER AHQISDRILS 
GELPLDLSVI YPLITQAPPP SQASMINIAT MVFIFAWFVG VIDSYRLGHG MDKAEQA