Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0636 |
Symbol | |
ID | 5611849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 774472 |
End bp | 774825 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640931481 |
Product | hypothetical protein |
Protein accession | YP_001472376 |
Protein GI | 157373776 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.325359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAG CCATTAAGGC CGCACTCATC TCGGCCTTTG TCTGCCCCGG CGGCGGTCAC TTTTACCTGA AACAATACAC CACGGGGACA CTTATCTCGG TCGCCATGCT CAGTGGATTG TTATACCTGC TCAATCAGGC CGTCGAAAGG GCCCATCAGA TATCCGATAG AATTTTAAGC GGTGAACTAC CGCTGGACCT CAGCGTCATC TACCCATTGA TCACGCAAGC CCCCCCTCCT TCTCAAGCAA GTATGATTAA TATCGCCACC ATGGTATTTA TCTTTGCCTG GTTTGTGGGG GTCATAGACT CTTATCGATT GGGTCATGGA ATGGATAAAG CTGAACAAGC CTAG
|
Protein sequence | MNKAIKAALI SAFVCPGGGH FYLKQYTTGT LISVAMLSGL LYLLNQAVER AHQISDRILS GELPLDLSVI YPLITQAPPP SQASMINIAT MVFIFAWFVG VIDSYRLGHG MDKAEQA
|
| |