| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0628 |
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| Symbol | |
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| ID | 5609989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 763415 |
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| End bp | 765820 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931473 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472368 |
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| Protein GI | 157373768 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.5767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCT ATAACATCGC ATTGGCGATT GCACTGATAT CTATCCCTGC CGCCAACGTG
TTTGCCGCGC CGACAAATAC CGCCACCATC ATAAAAAAGA GTCAGTCTGC CAAAGGTTTT
ATTAATCTCT TTTACTCTAA AGCTGATGGT GAGTTATACC TCGAGGCTAA TAAGCTTAAT
CAACCCTTTC TGCTGCTGAC CAGTTTACCC CAGGGGGTCG GTTCTAACGA CATCGGACTC
GATCGTGGCC AACTAGGTTA TACACGTATG GTGCAGTTCG AGCGCCACGG TCCTTACCTG
CTCCTTAAGC AACTCAATAC TCAATATCGC GCGAGTACAG ATAACAGCGC CGAGCAAAGA
GCCGTAAAAG AGGCGTTCGC CGAGTCGGTT CTGTGGCGTG GAAAGGTCAT TGATGGTAAG
AGAGACCTGG TCTCGATCAA TGAATTGGTA GTGAGCGATC TTTACGGAAT AGCCTCGACT
CTGGAGCAGA CAAAGCAGGG AAGTTACCAA CTCGACAAGG CGCGGTCGCT TATCTTACCC
GAAGGGGTCA AGTCCTTCGA GCGTAACAGC GACGTCGATG TGCTGCTTTC ATTTAACAGT
AAAAAAGCCG GGGAGTATGT TGCTCAGGTC ACCCCCGATG GTAAACATAT GTCGGTGCGC
CTGCGCTACT CGTTTATAGC GCTGCCAGAA GAGGGGTATA CCGCAAGAGA TTACCACCCC
ATGAGTGGTT ACCTCTCGGA TGAATACTTA GATTATGGCA CCGAGGTGGA TGAGGATATT
CGTCAGCGTC ATCTATTGCG TCATCGATTG CAGAAGGTGA CACCGGGCGA TGCGCCCAGC
GAAGTGGTTA AACCTATCAC CTACTATCTC GACCCAGGTG TGCCCGAGCC TATTCGTAGC
GCCCTGTTAG AGGGGGCGAA CTGGTGGGAA GAGGCGTTTA CTCAGGCAGG CTTTATTGGT
GGCTTTAAAG TTGAACTGCT TCCTGAGGAT GTCGATCCTC AGGATATCCG CTACAACGTG
ATCCAATGGG TACATAGGGC AACCCGTGGC TGGTCTTACG GCTCTGCAGT GGCCGATCCC
AGAACCGGTG AGATCATCAA GGGGCATGTC ACCTTGGGTA GTCAGCGCGT ACGTCAGGAT
CACCTTATCG CTCGCGGCCT AACGGCGGGC TGGGAAGATA GAGCGGCGGC CGATGAAGCG
GCTATGTCAC TCTCACTCGC CCGAATTCGC CAGCTTGCGG CCCACGAGGT CGGTCATACT
CTCGGGTTCG ATCATAACTT TGCCGCCTCG AGTAATGACA ATGCGTCTGT GATGGATTAC
CCCCATCCAC AGGTGACGTT ACAGGGAGAT AAGATCGACA TTTCGGCTCC CTATGGAGTA
GGACTCGGCA GTTGGGACAA GGTTATGGTC GAGTACGGCT ATAGTGAATA TGGCGATGAA
GCCCAGGAGT CGACTCAGCT TTCGGCACTG ATGAAAAAGA TGCAAATGGA CGGCCTGCGT
TTTATTGGGG AAGCAGATTC CCGCGCTAAA GGTGCCAGTC ATGCCTATGC GAGTCTGTGG
GATAACGGCA GCGATCCTGT CGCCGAGTTG ATCCGACTCG GTAAGGTGCG GGCACAGGCG
ATTGAGGATT TCTCAAACCT GGCTCTGTTA GCTAAGCAGC CGATGGGAGA GCTCAGTGAC
GCCTTTGTGC CGATCTATCT GCTGACCCGT TATCAGATAG CTGCTGCGGC TAAGTTTATC
GGCGGTACCG ATTACAATTA TTATGATGGC ATGGACGGCG AGTCCTGGCA TTACCTTGCT
CCGCAACTGC AGAAGAGTGC CCTGGATGCT CTGGTACAAA CACTGCAGCC ATCGGCTTTG
ACGATCTCCC AGCAACTGCA GGAAGCCTTA GTGCCTAAAT CGGGCAACTA TAATCGCAGT
CGGGAAAGTT TCGATTCCGG CCTGGGAGTG ATAAATGACC CACTGGGGAT GGCCGAAGTA
TTAAGCCGTC ACACCGTCAA ACAACTCTTT GCATCAGAGC GAATAAACCG GGTCAATCAG
GCTTATCTGA ACGATAAAGA GCAGCTCTCG GTTCCCGCTA TCGTGGACAA ACTGCTAGGC
AACACGCTCT ATGCCGATAT TCCCACCGGA CCAGAGTTGG GCGTCTGGAT GCGCGTTAAT
AGTGTCATCA TCGATGAGCT GCTGTCGGCA TACCACGATG AACGGACTCG CCCGGAAGTG
AAGGCACAAC TTGCAGATAG ATTGCGTTAT ACCCTTAAGC AACTCAAACG CAAAGTTAAA
CGTGCCAGTG CCTATGAGGC CGCTCATTTC TCCTGGTTAG CCGATGGGGT CGAGAGAGGG
CTGAAAGACG CAAAAGTTAA GCTGATCGAT AAGCCACTTA AGATGCCTCC TGGCTCGCCG
ATCTAA
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| Protein sequence | MKPYNIALAI ALISIPAANV FAAPTNTATI IKKSQSAKGF INLFYSKADG ELYLEANKLN
QPFLLLTSLP QGVGSNDIGL DRGQLGYTRM VQFERHGPYL LLKQLNTQYR ASTDNSAEQR
AVKEAFAESV LWRGKVIDGK RDLVSINELV VSDLYGIAST LEQTKQGSYQ LDKARSLILP
EGVKSFERNS DVDVLLSFNS KKAGEYVAQV TPDGKHMSVR LRYSFIALPE EGYTARDYHP
MSGYLSDEYL DYGTEVDEDI RQRHLLRHRL QKVTPGDAPS EVVKPITYYL DPGVPEPIRS
ALLEGANWWE EAFTQAGFIG GFKVELLPED VDPQDIRYNV IQWVHRATRG WSYGSAVADP
RTGEIIKGHV TLGSQRVRQD HLIARGLTAG WEDRAAADEA AMSLSLARIR QLAAHEVGHT
LGFDHNFAAS SNDNASVMDY PHPQVTLQGD KIDISAPYGV GLGSWDKVMV EYGYSEYGDE
AQESTQLSAL MKKMQMDGLR FIGEADSRAK GASHAYASLW DNGSDPVAEL IRLGKVRAQA
IEDFSNLALL AKQPMGELSD AFVPIYLLTR YQIAAAAKFI GGTDYNYYDG MDGESWHYLA
PQLQKSALDA LVQTLQPSAL TISQQLQEAL VPKSGNYNRS RESFDSGLGV INDPLGMAEV
LSRHTVKQLF ASERINRVNQ AYLNDKEQLS VPAIVDKLLG NTLYADIPTG PELGVWMRVN
SVIIDELLSA YHDERTRPEV KAQLADRLRY TLKQLKRKVK RASAYEAAHF SWLADGVERG
LKDAKVKLID KPLKMPPGSP I
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