| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0612 |
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| Symbol | |
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| ID | 5613126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 739740 |
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| End bp | 741452 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931457 |
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| Product | formate--tetrahydrofolate ligase |
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| Protein accession | YP_001472352 |
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| Protein GI | 157373752 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0010106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCG ATATCGAGAT CTCTCGTCAA ACCAAGCATC GACCCATTAC CCAAATCGCA
GAAAAATTCG GCATTACCTC ATCTGAGCTT GTCCCCTTTG GAGACGCTAA AGCTAAAGTA
AAGTTATCGA TTTTAAAGCG CGTAGATGAC AATTTAGAGG GGAAGTTAGT CATTGTCACG
GCCGTGACAC CCACGCCATT CGGTGAAGGA AAAACAGTCA CCAGCATAGG CTTAACTCAG
GGATTAAATG CTCTGGGTAA AAAAGCCTGC GCCTGTATTC GCCAGCCCAG TATGGGACCC
GTTTTTGGCA TTAAAGGAGG GGCTGCTGGT GGCGGTTACT CCCAGGTGGT CCCGATGGAG
GAGTTGAATC TGCATCTGAC CGGTGATATT CATGCCGTGA GTAGTGCCCA TAACTTAGCC
GCAGCGGCTA TCGATGCCAG ATTATTTCAT GAGTCCAGAA TGACGGCTGA CGAGTATCGG
GAGCAGTCGG GGCAAGCGCC CCTTAATATC GATCCTGAGA AGATCTTGTG GCGCCGGGTG
GTGGACCATA ATGAACGCAG TTTAAGAAAT ATTACCGTAG GGTTAGGAGC CAATAACGGC
CCCATACATG ACTCAGGATT TGATATCACC GCCGCTTCAG AGCTGATGGC AATATTGGCT
TTGAGTCTGG ACTTAAAAGA TATGCGCAGA CGTATCGGAA AGCTAGTGCT TGCACTGGAT
AGCCTGGGGC AACCGATAAC TGCTGAGACC TTAGGCGTTG CCGGCGCGAT GACTGTGATC
ATGAGTGATG CGATAGAACC TACGCTTATG CAGACATTAA CGGGCGATCC TTGTCTTATT
CATGCCGGCC CCTTTGCCAA TATCGCTCAC GGCAACTCAT CGATTATCGC CGACAGGATA
GCCTTAAAGC TTGCCGATAT CGTGGTGACT GAAGGTGGTT TTGGATCAGA CATGGGGTTC
GAAAAATTCT GCAATATCAA GACGCGCGTA TCGGGTAAGA CACCCGATGC CGCCGTTGTC
GTGGTGACAT TAAAAGCCCT GAAAGCCAAC TCGGGTATAG ATTCACAAAA TGATATCAAC
CGGCCCGATA TGGCGCGTCT ACAAGTAGGC TTTGCTAACC TGAAATGGCA TATCGATAAC
GTGAGTCAAT ATGGCGCTCC GGTAGTCGTG GCGATCAACC GCTTTCCAAC CGATACCTTT
GAGGAGCTGA CATGGCTTAA AGCTAAGGTG CTTGAAACTG CGGCTTTTGG TTGTGAGATC
TGTGAAGGAT TCAGTCAGGG AGCGAAAGGC GCCGAGGCAT TGGCCAGGGT CGTTGTCAGC
GCAACAGAGC AGAAATCTGA TTTTAAATTC CTATACCAGC TCGATGAGAG TATAGAGTCA
AAGCTGCTCA CTATCGCCGA GGCAGGGTAT GGCGCGGCAG GAATAAAATT GTCACCAGAC
GCCAAAATCC AGCTGCAAGA GATAAACTCA ATGGGGCTGG ATAAACTTGC TGTGTGTGTG
GCCAAGACCC CGTTATCGAT AAGTCATGAA CCTAAGGTTA AAGGAGTTCC GACCGATTTC
GAGCTGCCTA TCACTCAGTT GAAAATCAAT GCCGGCGCCG GTTTTATAAC AGCCTTGGTC
GGTAAGGTGA TGACAATGCC TGGGTTGGGT ATTAAGCCAG GATATTTGAA TGTGGATATC
AATGAAGACG ATGAAATAGT CGGATTGGCG TAA
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| Protein sequence | MLTDIEISRQ TKHRPITQIA EKFGITSSEL VPFGDAKAKV KLSILKRVDD NLEGKLVIVT
AVTPTPFGEG KTVTSIGLTQ GLNALGKKAC ACIRQPSMGP VFGIKGGAAG GGYSQVVPME
ELNLHLTGDI HAVSSAHNLA AAAIDARLFH ESRMTADEYR EQSGQAPLNI DPEKILWRRV
VDHNERSLRN ITVGLGANNG PIHDSGFDIT AASELMAILA LSLDLKDMRR RIGKLVLALD
SLGQPITAET LGVAGAMTVI MSDAIEPTLM QTLTGDPCLI HAGPFANIAH GNSSIIADRI
ALKLADIVVT EGGFGSDMGF EKFCNIKTRV SGKTPDAAVV VVTLKALKAN SGIDSQNDIN
RPDMARLQVG FANLKWHIDN VSQYGAPVVV AINRFPTDTF EELTWLKAKV LETAAFGCEI
CEGFSQGAKG AEALARVVVS ATEQKSDFKF LYQLDESIES KLLTIAEAGY GAAGIKLSPD
AKIQLQEINS MGLDKLAVCV AKTPLSISHE PKVKGVPTDF ELPITQLKIN AGAGFITALV
GKVMTMPGLG IKPGYLNVDI NEDDEIVGLA
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