| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0513 |
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| Symbol | |
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| ID | 5613876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 630551 |
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| End bp | 631477 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931359 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001472254 |
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| Protein GI | 157373654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAG ATAGACGTCA GGCGATGGGA AAAATTGTTG GTTTTGCCGG TGCCGCAGCA
GTGTCACCCG CCGTGTTCGC CGCTGATACA TGTCCGGTCG ATGGTGCTAT CGGTTTAGGT
AGTGATGGTG GTGCAGATTT GGGGGCGAAC TTACTGGCAT ACGTTGAGTT GGATCCTTTT
GAAGTCGCCA AGCGTGCCTA TGAAGGCTAT GTCCGTGGTG GTTGTATGTA CGGTGTGTTC
AATGCCGTAG TTAAGGAGCT TGCCGCTCAA GGGCATGAGG ATGCCTGTAA TTTTGCCGCC
ATTCCAACCA ATATTACAGT CTATGGTGGC TCCGGGGTTA AGGGCTGGGG CTCTATCTGT
GGCTGCGTCA ACGCCGCGGC TATGATTGTC AACATTCTGG GCGGTGTCGA TCAGGTTGCC
GTTATCGGTG CTATCAACCG CTATTATGAA AAGACCCCTA TGCCCCGTGG CGATGATAAA
TTTATGAATT ATATCGGTGC ACCTATTTTC CACAACGATG CCGGTGAACT GCTAACTCCT
GATATGATTG GTCAATCTAC GGCCGATTCC ATCTTATGTC ACACTTCGGT CTCACACTGG
TCTGCTGCAA GTAAGTACGG TGGGGCCCAT AAAGCTAAGT ATGAGCGTTG TGCTCAGGTG
ACAGCAGAAG TGGCTTTCAA GACGGTGGAG TTTTTAAACC AGGCGCTCAA AGGCGAGTTA
ACAACCGATC CTGAGCTGGA GATGGTCGCT AAAGGCAATG ATGACTGTTA CGGTTGCCAT
ACCGGAACCA AGCGTGAGCC TGATACCTAT ATTGGCTCGG ATGTGAATTC CTTTATGGAA
TGTCAAACTT GTCACGCGCC GCATGATGTT ACGTCTGGCC TGACAGGCAT GCACGCGGAT
GCGACTTGTA GCACTTGCCA CAACTAA
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| Protein sequence | MNLDRRQAMG KIVGFAGAAA VSPAVFAADT CPVDGAIGLG SDGGADLGAN LLAYVELDPF
EVAKRAYEGY VRGGCMYGVF NAVVKELAAQ GHEDACNFAA IPTNITVYGG SGVKGWGSIC
GCVNAAAMIV NILGGVDQVA VIGAINRYYE KTPMPRGDDK FMNYIGAPIF HNDAGELLTP
DMIGQSTADS ILCHTSVSHW SAASKYGGAH KAKYERCAQV TAEVAFKTVE FLNQALKGEL
TTDPELEMVA KGNDDCYGCH TGTKREPDTY IGSDVNSFME CQTCHAPHDV TSGLTGMHAD
ATCSTCHN
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