| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0510 |
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| Symbol | |
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| ID | 5612302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 626137 |
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| End bp | 626637 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931355 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001472251 |
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| Protein GI | 157373651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TAGCTACAAT ATTTATGATA ACGATGGCCC TTACAATTTC AGGCTGTGCA
AGTTCCGTTT CTGAAACGGC TAAAGTTGAA TACCTGACCT ATGTCAGCAC CGGGCAAGCC
GTACCGGTCA AACATTTCAC CGACTCTCAC GGTAATAGCA TAGATCTCAC CGAGTCACAC
AATGCCAAGT TGTTGATCCT GTTTGCGACC TGGTGCCCCG ACTCTCAACG GGCAATGAAA
GCATTGCAGG CATCGGATCT TATTTTAGAT CCCAACCTGG ATATCATAGG TATTGGCCGA
GAAGAGAACA AAGAGGTACT GGATAAGTTT GCCAATGAAT ATCAGATAAA CTTTCCCTTA
GTCGCCGATA GTGACCGCAG CATCTACGCC AAGTTTGCCA ACGCCGGGAT CCCACGCCTC
ATCTTGCTCG ATGGCGAGAA TCACATAGTC AAAGCTATCA TAGCCGAAGG CGACAACCCC
TTAGCCGAGG TTCGGTGGTA G
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| Protein sequence | MKQLATIFMI TMALTISGCA SSVSETAKVE YLTYVSTGQA VPVKHFTDSH GNSIDLTESH
NAKLLILFAT WCPDSQRAMK ALQASDLILD PNLDIIGIGR EENKEVLDKF ANEYQINFPL
VADSDRSIYA KFANAGIPRL ILLDGENHIV KAIIAEGDNP LAEVRW
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