| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0491 |
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| Symbol | |
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| ID | 5613843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 604714 |
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| End bp | 605553 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931336 |
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| Product | copper ABC transporter, permease protein |
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| Protein accession | YP_001472232 |
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| Protein GI | 157373632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT TTACATCCCC CGTATTGATT ATCGCCAGTA AAGAGATCTG TGATAGTTCC
CGAAATCGTT GGTTAGCTTT CATGGGTAGC ATCTTCCTGT TGCTCTCCTT GAGTGTAACC
TTTGCCGGCA GTGCCGTTAC CGGAAGTCTC TACCTTCCGG AGCTTGCCAG CCTGATGAGT
AGCCTGTCGA CTATATCGGT ATTTATCATC CCTTTAGCGG CGATCTTACT CAGTTATGAT
AGTTTCGTCG GTGAAGATGA GTCTGGTACC TTGCTCCTGC TGCTCTCCTA CCCTCTGACC
CGATTACAGA TCCTCTGTGG AAAATTACTC GGACATATGA CTGTCATGCT ATTGGCAACC
AGTTTTGCGT TTGGAGTTAC TGCAATATTG CTGCTGTTAA TTGGCGAGCA ATATCAAGTT
GCCGAGTTAA TCGGTGCATT TGCTCAGTTT CTGCTAAGTA GCAACTTATT GGCCTTGACC
TTTATTTTAT TCAGCTACAT CGTCAGCCTT AAAAGCACTG AGAAGGCCAA GGCGGTGGGC
ACCCTGCTGC TGGTGTGGTT TCTGTTTGTA CTTATCTATG ATCTGTTACT ACTGACTATT
TTGGTTTCAG ATCTCTCCTT TGCGAATCAA TATGTTGTAA ATATCTTAAT TGCATTGAGT
CCGACCGATC TCTATCGGGC CATAAACCTG ATGGCTATCG AGGGGGGCGA TGGGAGAGGA
AGTCTTGCAA TGCTCACAGA GACCGACTGG GGACTGCCTG GGATGTATGT CCTGATGTTG
TTATGGATAG CGCTGTTAAG TTGGATCTCC CATGGAATTT TTAAGCGTAA ACGCCTCTGA
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| Protein sequence | MNRFTSPVLI IASKEICDSS RNRWLAFMGS IFLLLSLSVT FAGSAVTGSL YLPELASLMS
SLSTISVFII PLAAILLSYD SFVGEDESGT LLLLLSYPLT RLQILCGKLL GHMTVMLLAT
SFAFGVTAIL LLLIGEQYQV AELIGAFAQF LLSSNLLALT FILFSYIVSL KSTEKAKAVG
TLLLVWFLFV LIYDLLLLTI LVSDLSFANQ YVVNILIALS PTDLYRAINL MAIEGGDGRG
SLAMLTETDW GLPGMYVLML LWIALLSWIS HGIFKRKRL
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