Gene Ssed_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0473 
Symbol 
ID5613016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp586226 
End bp586804 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content50% 
IMG OID640931318 
Producthypothetical protein 
Protein accessionYP_001472214 
Protein GI157373614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA CCGCACTAAC TCAGCCACTT TACGATCACC TTTACCGTGA TATCCTCCAG 
TTCCGTTCAA CCTTCGACCT ACCGAGCGAA GATGAAACCA CATTGGATGA CAAGGCTGAC
ACCCTGCACA CTTCGTTGGC TATCGAAGAG CTAACCGAAC TTGCCGAAGC CGATACCCGC
ATGGAACAAG CCGACGCCAT CGTCGACTCT GTTTATGTCC TTATGGGCCG CTTAGTTCAT
CTTGGTGCCA CTGGGGTAAA CGATCGCATC GAGATTAGCT ACGTGATCGA CCTGCTGTTA
CATGTCGCCA AGAACCGCGA AATTGATTTT GTGACCTGCT GGGATGAAGT TCACTCAAGC
AACATGAGTA AGGTGTGTCG CAACGAGCAG GAATTAACCG AAACTATCGA ATTTTACGCC
AAGCAAGGCG TCGAGATCGT CGGCAGCAAG AAAGGTGACT TCATCATCGC CAAGTGCGCC
AAAGATGTAG ATATGGCGGG TAAGGTCGTT CGTCAGGGTA AGGTTTTGAA ATCGGTTTAC
TACCGACCGG CAGATCTGGC AAAGCTAGTG AAAGCTTAG
 
Protein sequence
MKLTALTQPL YDHLYRDILQ FRSTFDLPSE DETTLDDKAD TLHTSLAIEE LTELAEADTR 
MEQADAIVDS VYVLMGRLVH LGATGVNDRI EISYVIDLLL HVAKNREIDF VTCWDEVHSS
NMSKVCRNEQ ELTETIEFYA KQGVEIVGSK KGDFIIAKCA KDVDMAGKVV RQGKVLKSVY
YRPADLAKLV KA