Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0473 |
Symbol | |
ID | 5613016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 586226 |
End bp | 586804 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640931318 |
Product | hypothetical protein |
Protein accession | YP_001472214 |
Protein GI | 157373614 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA CCGCACTAAC TCAGCCACTT TACGATCACC TTTACCGTGA TATCCTCCAG TTCCGTTCAA CCTTCGACCT ACCGAGCGAA GATGAAACCA CATTGGATGA CAAGGCTGAC ACCCTGCACA CTTCGTTGGC TATCGAAGAG CTAACCGAAC TTGCCGAAGC CGATACCCGC ATGGAACAAG CCGACGCCAT CGTCGACTCT GTTTATGTCC TTATGGGCCG CTTAGTTCAT CTTGGTGCCA CTGGGGTAAA CGATCGCATC GAGATTAGCT ACGTGATCGA CCTGCTGTTA CATGTCGCCA AGAACCGCGA AATTGATTTT GTGACCTGCT GGGATGAAGT TCACTCAAGC AACATGAGTA AGGTGTGTCG CAACGAGCAG GAATTAACCG AAACTATCGA ATTTTACGCC AAGCAAGGCG TCGAGATCGT CGGCAGCAAG AAAGGTGACT TCATCATCGC CAAGTGCGCC AAAGATGTAG ATATGGCGGG TAAGGTCGTT CGTCAGGGTA AGGTTTTGAA ATCGGTTTAC TACCGACCGG CAGATCTGGC AAAGCTAGTG AAAGCTTAG
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Protein sequence | MKLTALTQPL YDHLYRDILQ FRSTFDLPSE DETTLDDKAD TLHTSLAIEE LTELAEADTR MEQADAIVDS VYVLMGRLVH LGATGVNDRI EISYVIDLLL HVAKNREIDF VTCWDEVHSS NMSKVCRNEQ ELTETIEFYA KQGVEIVGSK KGDFIIAKCA KDVDMAGKVV RQGKVLKSVY YRPADLAKLV KA
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