| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0449 |
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| Symbol | |
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| ID | 5610380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 561951 |
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| End bp | 562967 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931294 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001472190 |
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| Protein GI | 157373590 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.234501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA CTAAGACAAT ACTCGCTATC ACCCTGACGA GTTTGCTTGC GGCATGTGGT
GGCAGCGATG ATAACTCATC TCCTGACCCT GAATCCGGTA TCTTTAACCT GGGAGTATCG
GACAATCCAG CCGATGCCGA GATAGTTAAC ATCGCATTTA AGCAAGTCGT CCTAAAGAAT
GATGAAGGCT CTATCTCATT TGATGCCATA GAAGGTGGTG GACTCAAGCA TGTCGATCTA
CTTACGGTAC AAGGCGCCGA GGTCGCGACA CTCGTCAGTG GCGAATCGGT TCCGGTAGGT
GAGTACCAGA TGTGTATCTA TATGCAAAAT AATGAGGCCG CAGCCTCTGG AAGCTCTTAT
GTAGAAACAG CCGATGGCAT AGCCGGACTG ACTACCAACA GCAATGGCTC CTGCGGCGGT
GTTGGCGCCG AAGATCCAGA CACGGGTCGC CTGTTCTTAA ATAAAACCTT TACCATCGAG
GAGGGAAGCA ACACCTTCGT TGCCGAGTTC AATCTGGCCA AAGGCCTGCA GGCCCCTCAC
GGCAATAAAG ATTACTGGAC CTTGAAACCC ACATCTGTGC AGCTGGTCAA TGCCGCAGAG
ATAGGCGGGA TTTCCGGGCA GGTAAGCTCT GCTACTTTCT CTGAATGTCA GTCCGCGGCT
GTCGGATTAG AACTCCCTGA TGAATATAGT CAGGCAGTTT ATCTCTACCC AATCGATACG
ATACTGACGA ATATGGCCGA CTTCAGGGCC GAAAATGAGC CTTATCTGCT GACAGAGGTC
GCGCCTCTCG CATCGGCTCG TGTTAACCCA ATTTTTGACG AAGGTGGGAC TGAGACTGGT
CAGGGATACG AGTTCGGTTT TCTCGATGCC GGCACCTATA GCTTAGGCTA CACCTGTGTT
GCTCAACAAG ATGACTCAGA TGAAAATGAT ATTGATAAGA CTCCTCCCTT CTTTATCCAT
ATCGACGAGC AAGGGGTTGT TGTAGAGCTT GGAGAGGTCA CAGAGCGTAA CTTCTAG
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| Protein sequence | MKHTKTILAI TLTSLLAACG GSDDNSSPDP ESGIFNLGVS DNPADAEIVN IAFKQVVLKN
DEGSISFDAI EGGGLKHVDL LTVQGAEVAT LVSGESVPVG EYQMCIYMQN NEAAASGSSY
VETADGIAGL TTNSNGSCGG VGAEDPDTGR LFLNKTFTIE EGSNTFVAEF NLAKGLQAPH
GNKDYWTLKP TSVQLVNAAE IGGISGQVSS ATFSECQSAA VGLELPDEYS QAVYLYPIDT
ILTNMADFRA ENEPYLLTEV APLASARVNP IFDEGGTETG QGYEFGFLDA GTYSLGYTCV
AQQDDSDEND IDKTPPFFIH IDEQGVVVEL GEVTERNF
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